FC921173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 61/175 (34.86%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 N+F ++A+ H + I +L+ K+ K ++C+G+S +SQ L A+ R L+ +++ Y+ +Y++ F RS+YM + D F + ++VP A+LALLI+ H+ + W F +YLEAV++LPQL ++Q+T E TAHY+FALG R L +W+ R+ Sbjct: 2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYA--TVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 NLF A+ H+I I VL+ K+ K ++C G+S +SQ L A+ R F + + + +Y++ +++Y + D+F I ++V+P +LALLI+ I + W F +YLEAV+++PQL ++ T E TAHY+FALG RFL +WV R+ Sbjct: 2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 N+F + A+ H++ I +L+ K+ K ++C G+S +SQ L A+ R F Y ++ +Y++ +++Y + D F I ++V+P +LAL+I+ + + W F +YLEAV+++PQL ++ T E TAHY+FALG RFL +WV R+ Sbjct: 2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYIFNWVYRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 57/176 (32.39%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 N+F +A + H + VL+ K+ K+CAG+SLK+QEL A+ R ++ F+ Y+ +++ +R + +R SY +D+D F ++V+PC +LAL+I+ + + W F +YLEAV++LPQL ++Q T+ ++ T Y+F LG R +WV R+ Sbjct: 2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLS--IVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFT---FKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWVYRY 172
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 56/172 (32.56%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 NLF ++A+ VH + I L+ K++ K C G+SL+SQ L I R F Y ++ + IY+I R++Y + D ++Y++VPC VLA + T + I W F ++LEAV++LPQ+ ++++T VE + Y+F LG+ R L +W+ R+ Sbjct: 4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWIYRY 172
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 57/174 (32.76%), Postives = 98/174 (56.32%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 N+F A + H I +L+ K+ K ++CAG+S KSQ L A+ R L+ ++V Y+ +Y++ +++Y + D+F I +++VPCA+L+L+I+ + + + W F +YLE+V++LPQL ++ T E T+HY+FALG R L +WV R+ Sbjct: 2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN--SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT---VMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R L+ +++ Y+ ++MI +++Y + D F + ++VVP AVLA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALGV R L +W+ R+ Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD21_XENTR (ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 58/165 (35.15%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 197 HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 H I +L+ K+ K ++CAG+S KSQ L AI R L+ +F+ Y+ I+MI +++Y + D F + +++VP A+LA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALG+ R L +W+ R+ Sbjct: 12 HLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYNTSMKMVYVASSYA--TIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRALYLFNWIWRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 60/175 (34.29%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R L+ +++ Y+ ++MI +++Y + D F + ++VVP A+LA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALGV R L +W+ R+ Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRY 170
BLAST of FC921173 vs. ExPASy Swiss-Prot
Match: ERD2_ARATH (ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 60/176 (34.09%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 170 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLRF 679 N+F A + H I + +L+ K+ K+CAG+SLK+QEL A+ R L+ +V Y+ +++ +R + +R SY +D D F YVV+ C VL L+++ + + +FWAF +YLEAV++LPQL ++Q + V+ T YV LG R L +W+ R+ Sbjct: 2 NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN--SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT---VQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRY 172 The following BLAST results are available for this feature:
BLAST of FC921173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921173 ID=FC921173; Name=FC921173; organism=Citrus clementina; type=EST; length=681bpback to top |