FC921202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 2.832e-67 Identity = 125/177 (70.62%), Postives = 148/177 (83.62%), Query Frame = 3 Query: 153 ASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSK 683 A Q +REW+GIQQFPPATQ+ +E+V++LT+LVMGKGGVGKSSTVNS+IGEKA VSTFQSEG RP +VSR+R+GFTLNI+DTPGLIEGGYVN AI +IKRFLLN TIDVLLYVDRLDVYRVD+LD+Q+ AITD FG++IWK++ +VLTHAQ S PDGL+Y F SK Sbjct: 3 ALQTLREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSK 179
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.831e-67 Identity = 125/180 (69.44%), Postives = 145/180 (80.56%), Query Frame = 3 Query: 144 MSMASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSK 683 M+ Q +REW GI F PATQT QE+VN+LTILVMGKGGVGKSSTVNSIIGE+ V++S FQSEGPRPVMVSRSRAGFTLNI+DTPGLIEGGY+N A+ +IK FLL+KTIDVLLYVDRLD YRVDNLDK + +AITD+FG+ IW +A++ LTHAQ S PDGL Y+ F SK Sbjct: 1 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSK 180
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.757e-61 Identity = 112/174 (64.37%), Postives = 139/174 (79.89%), Query Frame = 3 Query: 162 VIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSK 683 ++REW+G QQFP ATQ Q+++N++T+LV+GKGGVGKSSTVNS+IGE+ V VS FQ+EG RPVMVSR+ GFT+NI+DTPGL+E GYVN+ A++LIK FL+N+TIDVLLYVDRLDVYRVD LDKQ+ AIT FG++IW + L+VLTHAQ S PD L YE F SK Sbjct: 4 LVREWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSK 177
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 243 QENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSK 683 +E + +L ILV+GK GVGKS+T+NSI+G + ++ F +S + G + +DTPGL N + +K+ + D++LYVDRLD D + + R IT + G IWK A++ LTHA + PDG L Y+VF ++ Sbjct: 850 EELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQ 1004
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 264 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGG---YVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG 656 TI+V+GK GVGKS+T+NSI E ++ FQ + + G + ++DTPGL+ + N ++ ++ F+ D++LY+DRLD+ D+ D + R ITD FG IW A++ LTHA + PDG Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDG 591
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 264 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG 656 TI+V+GK GVGKS+T+NSI E FQ R V G + ++DTPGL+ N + +K F+ D++LY+DRLD+ D+ D + R I+D FG IW A++ LTHA PDG Sbjct: 576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDG 709
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 255 NTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIE--GGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPD 653 N +L++G+ GVGKSST+N++ G + V + +S P SR GF LNI+DTPG ++ G V+ + + I+R+L KTI +L+V++ R D + + T+ G Q+W+ A +VLT+A LPD Sbjct: 150 NECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPD 283
BLAST of FC921202 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 258 TLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGL----IEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLP----DGLDYEVFCSKGQRL 695 +L ILV+GK GVGKS+T+NSI G+ F+ R V + +G + +DTPG N + IKR++ + DV+LY+DRLD+ + D + + IT+ FG IW ++V+TH+ + ++YE + GQR+ Sbjct: 166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSAATTEGRNGQSVNYESYV--GQRM 317 The following BLAST results are available for this feature:
BLAST of FC921202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921202 ID=FC921202; Name=FC921202; organism=Citrus clementina; type=EST; length=700bpback to top |