FC921219

Overview
NameFC921219
Unique NameFC921219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13046 contig Ccv1_Contig13046:1095..1799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921219 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.575e-80
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2
Query:    2 EHGLFGLVSGVEILSGGVIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGD 286
            E GLFG+VS ++ LSGG++RLQVAEAEVNNISIRFLDRKTGEPTKGKT PETILRQLTTKKGQVYSMLQGKRDV+TVL MGIMEDVSIIPQPAGD
Sbjct:  289 ERGLFGIVSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPETILRQLTTKKGQVYSMLQGKRDVDTVLAMGIMEDVSIIPQPAGD 383          

HSP 2 Score: 150.599 bits (379), Expect = 1.575e-80
Identity = 76/117 (64.96%), Postives = 83/117 (70.94%), Query Frame = 3
Query:  354 DTSMVDLILNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFVYSHRNVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVHRNQPDNSSQTIGRVTA 704
            D+  VDLI+N VERP                         F YSHRN+FGRNQKLN+SLERGQIDSI RINY DPWIEGDDK+TSR++MVQNSRTPG LVH NQPDNSS TIGRVTA
Sbjct:  383 DSGKVDLIMNCVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSSLTIGRVTA 499          
BLAST of FC921219 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.453e-70
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 2
Query:    2 EHGLFGLVSGVEILSGGVIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGD 286
            E GL GLVS  EILSGG++RLQV+EAEVNNI+IRFLDR+TGEPT GKT+PETILR LTTKKGQ Y+  Q KRDVET+LTMGIMEDV+IIPQP GD
Sbjct:  221 ERGLTGLVSYAEILSGGILRLQVSEAEVNNINIRFLDRRTGEPTVGKTQPETILRHLTTKKGQAYNRAQVKRDVETILTMGIMEDVTIIPQPVGD 315          

HSP 2 Score: 134.42 bits (337), Expect = 6.453e-70
Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 3
Query:  348 IEDTSMVDLILNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFVYSHRNVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTA 704
            + D++ VDL++N+VERP                         F YSHRNVFGRN+KLN+SLERGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA
Sbjct:  313 VGDSNKVDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTA 432          
BLAST of FC921219 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.453e-70
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = 2
Query:    2 EHGLFGLVSGVEILSGGVIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGD 286
            E GL GLVS  EILSGG++RLQV+EAEVNNI+IRFLDR+TGEPT GKT+PETILR LTTKKGQ Y+  Q KRDVET+LTMGIMEDV+IIPQP GD
Sbjct:  221 ERGLTGLVSYAEILSGGILRLQVSEAEVNNINIRFLDRRTGEPTVGKTQPETILRHLTTKKGQAYNRAQVKRDVETILTMGIMEDVTIIPQPVGD 315          

HSP 2 Score: 134.42 bits (337), Expect = 6.453e-70
Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 3
Query:  348 IEDTSMVDLILNVVERPXXXXXXXXXXXXXXXXXXXXXXXXXFVYSHRNVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTA 704
            + D++ VDL++N+VERP                         F YSHRNVFGRN+KLN+SLERGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA
Sbjct:  313 VGDSNKVDLVMNLVERPSGGFSAGGGISSGITNGPLSGLIGSFAYSHRNVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTA 432          
The following BLAST results are available for this feature:
BLAST of FC921219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH1.575e-8088.42Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSJ6.453e-7078.95Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSI6.453e-7078.95Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionC32102E09EF RVDevelopN Citrus clementina cDNA clone C32102E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921219 ID=FC921219; Name=FC921219; organism=Citrus clementina; type=EST; length=705bp
GGAGCATGGTCTATTTGGCTTGGTTTCTGGTGTTGAAATTCTTTCTGGAG
GAGTAATTAGATTACAAGTTGCAGAAGCTGAGGTCAATAATATTTCCATC
CGTTTCCTTGACAGGAAGACTGGTGAGCCAACTAAAGGGAAGACGAGGCC
TGAAACAATTCTTAGACAACTTACTACCAAGAAGGGACAGGTCTACAGCA
TGCTTCAAGGGAAAAGAGATGTGGAGACTGTATTGACCATGGGAATCATG
GAAGATGTTAGCATTATTCCTCAACCTGCAGGAGATGTATGCATGTGGAT
GTCCTCCTTTATGGTGTTTGGATTGCAAGATCGTTTGTTTTGGCAACATT
GAAGACACTAGCATGGTTGATTTGATTTTGAATGTTGTTGAGCGGCCAAG
TGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGGATCACAAGTGGCC
CTTTATCCGGACTCATTGGAAGCTTTGTTTATTCTCATAGGAATGTTTTT
GGAAGAAACCAAAAACTCAATATTTCCTTAGAGAGGGGCCAAATTGATTC
TATATTGCGCATAAATTACATTGACCCTTGGATTGAAGGAGATGACAAAC
AAACATCAAGAACTATGATGGTTCAGAATTCAAGAACCCCTGGACCGCTT
GTTCATAGGAACCAACCTGACAACAGTAGTCAGACCATTGGACGTGTGAC
AGCCA
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