FC921220

Overview
NameFC921220
Unique NameFC921220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14270 contig Ccv1_Contig14270:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.306e-56
Identity = 101/212 (47.64%), Postives = 144/212 (67.92%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDLCVPKDF 680
            HFVLVHG   GAW WYK+KP LE+AGH+VTA+DL+A+GI+ +++ ++H+F +Y+EPL+E++AS+  DEKVV++GH           E +P KISVA+F++A MPD  H  +Y  E++ E+ P+   LD+QFS   +      ++  G  F+ LK++Q    ED+EL KML RPGS+F  +L+KA KFS E YGSV R Y+ C ED   P +F
Sbjct:   12 HFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEF 223          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.392e-45
Identity = 92/214 (42.99%), Postives = 130/214 (60.75%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDLCVPKDFSI 686
            HFVL+H   HGAW W+K+KP LEA GH+VTALDL ASG+D ++I+++ SF EY+EPLL  L +L   EKV++VG            +K+  KI+ A+F  + +PDT+H PSYVV++  E  P  +W DT +            L  G++ L   LY L  PE+ EL KML R GS+F + L+K   F+ EGYGS+ ++YV   +D     +F +
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFP--DWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQL 216          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.111e-42
Identity = 87/213 (40.85%), Postives = 129/213 (60.56%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQ-FSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDLCVPKDF 680
            HFVL+H   HGAW W+K+KP LE AGH+VTALD+ ASGID ++I+ ++SF EY+EPLL  L  L   EKV+IVG            +++  KI+  +F  + +PDT H PSY VE+  E  P  +W DT+ F+  + +  +  T+  G+  L   L+      + EL KM++R GS+F + L++  KF+ +GYGS+ +VY+   +D     DF
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESFP--DWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDF 215          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41
Identity = 88/209 (42.11%), Postives = 124/209 (59.33%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSA-DEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFER-IPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE--LSKANKFSNEGYGSVNRVYVVCKED 659
            HF+LVHG  HGAWCWY+V   L AAGHR TALD+ ASG    ++ +V +F EY+ PLL+ +A+ +A  E++V+VGH           E+FP K++ A+F+ A MP          E F  R  P G  +D +   I++S  S   +  G +FL  K YQ SP ED+ L KML+RPG+ F+D+  +   +  +N  YGSV +VYV+ K D
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEGLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKAD 218          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41
Identity = 88/209 (42.11%), Postives = 124/209 (59.33%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSA-DEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFER-IPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE--LSKANKFSNEGYGSVNRVYVVCKED 659
            HF+LVHG  HGAWCWY+V   L AAGHR TALD+ ASG    ++ +V +F EY+ PLL+ +A+ +A  E++V+VGH           E+FP K++ A+F+ A MP          E F  R  P G  +D +   I++S  S   +  G +FL  K YQ SP ED+ L KML+RPG+ F+D+  +   +  +N  YGSV +VYV+ K D
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEGLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKAD 218          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40
Identity = 84/207 (40.58%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE-LSKANKFSNEG-YGSVNRVYVVCKED 659
            HFV VHG  HGAWCWY+V   L AAGHR TALD+ A+G    +  +V S  EY+ PLL+ +A+ +  E++V+VGH           E+FP K++ A+FL A MP         +E F  RI    ++D++  V++++   R  +  G   L  KLY  SPPED+ L  ML+RPG+ ++D+ + K      EG YGSV RV++V  +D
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRIKPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDD 213          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40
Identity = 84/207 (40.58%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE-LSKANKFSNEG-YGSVNRVYVVCKED 659
            HFV VHG  HGAWCWY+V   L AAGHR TALD+ A+G    +  +V S  EY+ PLL+ +A+ +  E++V+VGH           E+FP K++ A+FL A MP         +E F  RI    ++D++  V++++   R  +  G   L  KLY  SPPED+ L  ML+RPG+ ++D+ + K      EG YGSV RV++V  +D
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRIKPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDD 213          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 71/213 (33.33%), Postives = 105/213 (49.30%), Query Frame = 3
Query:   48 FVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGE--WLDTQFSVIDSSNPSRKTLF-FGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDLCVPKD 677
            FVLVHG   GAWCWYK+   LE +G     +DLT  G +M     V +  EY++PL+++L +L  +EKV++VGH           E+FP KIS AIF+ A M     +P  V   F E + S E    ++QF +  +      T F F    +    +  SP +D+ L  + +RP  V +  + +    + E YG   R YV   +D  +  D
Sbjct:   98 FVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRPFDV---FSEELGSAERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGLYFNQSPNKDIALAMISMRP--VPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPD 305          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 72/206 (34.95%), Postives = 99/206 (48.06%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFS-NEGYGSVNRVYVVCKED 659
            HFV VHG++HGAWCWYK+   L AAG + T++DLT +GI++     V  F  YN PL  +L+ L +  K+V+VGH            KF  KIS+ ++L A M     QP          +  GE    ++   + ++     +     F     Y  SP EDV L   LLRP    V  L  A+K S N     V RVY+   +D
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADMV----QPGSTSSTHDSIMTVGEEDIWEYIYGEGADKPPTGVLMKEEFRRHYYYSQSPLEDVSLASKLLRPAP--VRALGGADKLSPNPEAEKVPRVYIKTAKD 212          
BLAST of FC921220 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 71/206 (34.47%), Postives = 100/206 (48.54%), Query Frame = 3
Query:   45 HFVLVHGSNHGAWCWYKVKPQLEAAGHRVTALDLTASGIDMKKIQDVHSFYEYNEPLLEILASLSADEKVVIVGHXXXXXXXXXXXEKFPHKISVAIFLTAFMPDTKHQPSYVVERFFERIPSGEWLDTQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSV-FVDELSKANKFSNEGYGSVNRVYVVCKED 659
            HFV VHG++HGAWCWYK+   L+AAG + T++DLT +GI +     V    +YN PL  +L+ L    KV++VGH            KF  KIS+AI+L A M     QP  +       I  GE    +++  + ++     +     F+    Y  SP EDV L   LLRP  +    +L K     N     V RVY+   +D
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMV----QPGSIPSPHLSNIHVGEEDIWEYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDVTLSSKLLRPAPMRAFQDLDKLP--PNPEAEKVPRVYIKTAKD 211          
The following BLAST results are available for this feature:
BLAST of FC921220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE2.306e-5647.64Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR2.392e-4542.99Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES1.111e-4240.85Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ4.668e-4142.11Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI4.668e-4142.11Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PIR7A_ORYSJ1.774e-4040.58Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI1.774e-4040.58Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
Y1399_ARATH1.155e-2333.33Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA1.155e-2334.95Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH1.971e-2334.47Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionC32102E10EF RVDevelopN Citrus clementina cDNA clone C32102E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921220 ID=FC921220; Name=FC921220; organism=Citrus clementina; type=EST; length=709bp
GAACGGAGAAAATTAAGAAAATGGCAGAAGCAAAGAAACAGAAGCATTTT
GTTCTGGTGCATGGATCAAACCATGGAGCCTGGTGCTGGTACAAGGTGAA
GCCACAGCTGGAGGCAGCGGGTCACCGGGTGACGGCGCTGGACCTTACAG
CCTCTGGCATCGACATGAAGAAAATCCAGGATGTTCATTCATTTTACGAA
TACAATGAACCTCTGTTGGAGATTTTGGCCTCACTTTCGGCAGACGAAAA
GGTCGTAATTGTTGGACACAGCCTTGGAGGCTTGAGTTTGGCCCTGGCAG
CTGAAAAGTTCCCGCACAAAATTTCAGTTGCTATTTTCTTAACAGCATTC
ATGCCAGACACCAAACACCAACCATCTTATGTTGTGGAGCGGTTTTTTGA
AAGGATTCCAAGTGGGGAATGGTTGGACACTCAATTTTCAGTGATTGACT
CATCAAATCCTTCTCGCAAGACATTATTTTTCGGTTACAGCTTCTTGACT
CTCAAGCTGTATCAGCTTAGTCCTCCTGAGGACGTGGAGCTGGGAAAGAT
GTTATTGAGGCCTGGATCAGTATTTGTTGATGAATTATCCAAGGCAAATA
AGTTCAGTAATGAAGGATATGGGTCCGTNAACCGAGTCTATGTGGTATGC
AAGGAGGATCTTTGTGTTCCTAAGGATTTCAGCATTGGATGATCCAAACA
ATCTGNTGA
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