FC921234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921234 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.548e-71 Identity = 131/223 (58.74%), Postives = 169/223 (75.78%), Query Frame = 1 Query: 1 FDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYV-DPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLAMNAGRMGGSGQVAYGGSFEAILRGADYPVRNDNISLTMTALSFNKEVVLTGGFQSEFRPIRGLNMSVNANLNSRKMGQVCIKLNSSAHMEIALLAVFSIFRGLLRRKAAE 666 FDGIN+ETA +I N+FAS GQ+++DK F I SE+ AAY + T+ + +D+QSSG+D++Y+ G TKL+ FKHN TD GV LTSFG K YVG KLED+LLVGKR+KL NAG+M GSGQ A GGSFEA +RG DYPVRN+ I LTMTALSF +E+VL G Q++FRP RG N+ VN N+N+RKMG++ +KLNSS H EIAL++ ++F+ L+RR E Sbjct: 555 FDGINIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTMFKALVRRSKTE 777
BLAST of FC921234 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.407e-37 Identity = 77/228 (33.77%), Postives = 131/228 (57.46%), Query Frame = 1 Query: 1 FDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLAMNAGRMGGSGQVAYGGSFEAILRGADYPVRNDNISLTMTALSFNKEVVLTGGFQSEFRPIRGLNMSVNANLNSRKMGQVCIKLNSSAHMEIALLAVFSIFRGLLRRKAAENKAQRH 684 ++G+N E +K + S +GQ+TKDK D ++ E A++ EG + +G D+Q++GK++ YT+ T+ F+ N G+S+T G+ G K+ED L+ KR ++ M+ G M G VAYGG+ EA R DYP+ +L ++ + ++ ++ + G QS+ R N+ ANLN+R GQV I++NSS +++A++A+ +F+ LL + E H Sbjct: 862 YEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSIRVNSSEQLQLAVVALVPLFKKLLTYYSPEQMQYGH 1089
BLAST of FC921234 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37 Identity = 74/216 (34.26%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 1 FDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLAMNAGRMGGSGQVAYGGSFEAILRGADYPVRNDNISLTMTALSFNKEVVLTGGFQSEFRPIRGLNMSVNANLNSRKMGQVCIKLNSSAHMEIALLAVFSIFRGLL 648 ++G+N E +K + S++GQ+TKDK D N+ E A++ EG + +G D+Q+ GK++ YT+ T+ NF+ N G+S+T G+ G K+ED + K ++ M+ G M G AYGG+ EA LR DYP+ +L ++ + ++ ++ + G QS+ R N+ ANLN+R GQV +++NSS +++A++A+ +F+ LL Sbjct: 980 YEGVNAERLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSVRVNSSEQLQLAMVAIVPLFKKLL 1195
BLAST of FC921234 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34 Identity = 77/227 (33.92%), Postives = 124/227 (54.63%), Query Frame = 1 Query: 1 FDGINLETAVEIKSNVFASIAGQITKDKHDFNIHSESAAAYVDPEGPTYCIGLDVQSSGKDMIYTVHGNTKLRNFKHNVTDCGVSLTSFGNKNYVGAKLEDSLLVGKRLKLAMNAGRMGGSGQVAYGGSFEAILRGADYPVRNDNISLTMTALSFNKEVVLTGGFQSEFRPIRGLNMSVNANLNSRKMGQVCIKLNSSAHMEIALLAVFSIFRGL---LRRKAAENK 672 +DG+N E ++ + S A+ Q+TKDK +FNIH +S+ + E + G D+Q+ GK + Y V G TK +N + N T G S+T G G KLED + +GKRL L + G M G AYG + E LR AD+P+ D S ++ + + ++ L QS+ R +++ A LN++ GQ+ ++ +SS ++IAL A+ I + +R +A +K Sbjct: 1273 YDGVNAEHSLALASRFPATATVQVTKDKKEFNIHLDSSVSAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWRGDLALGANLQSQVSVGRNSKIALRAGLNNKMSGQITVRTSSSDQLQIALTAILPIAMSIYKSIRPEATNDK 1499 The following BLAST results are available for this feature:
BLAST of FC921234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921234 ID=FC921234; Name=FC921234; organism=Citrus clementina; type=EST; length=711bpback to top |