FC921271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16 Identity = 49/148 (33.11%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L R+ V D +G+ + R S ++ +D +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 47/148 (31.76%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G + R S ++ +D +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 46/148 (31.08%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15 Identity = 46/148 (31.08%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 469
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15 Identity = 46/148 (31.08%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S ++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFP 469
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14 Identity = 47/147 (31.97%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN--IVRGGHRLATVLMYLSDVAEGGETVFPN 585 +I P K + P Y ++D E + + LAK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ + + G+RLAT L Y+SDV GG TVFP+ Sbjct: 324 LIAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPD 470
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.933e-14 Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDY----FSDKVNIVRGGHRLATVLMYLSDVAEGGETVFP 582 I+ P K + KPR + ++D E + + LAK +L R+ V D +G+ + R S ++ + +++ I +I T L E++QV Y G +YEPH+D+ D + G+R+AT L Y+SDV+ GG TVFP Sbjct: 304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFP 451
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 44/144 (30.56%), Postives = 77/144 (53.47%), Query Frame = 1 Query: 160 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVF 579 P KV+ + + P A +++ + D E + + LA +LKR+ V ++ +GE + + R S ++ D +I + +I +T L + E++QV Y G Y+PH+D+ + + G+R+ATVL Y+S GG TVF Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF 458
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14 Identity = 48/162 (29.63%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 160 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFPNAEEPPRRRTPATNDDL 633 P KV+ + P A +++ ++D E + LAK +L R+ V D+++G+ + R S ++ + + ++ + +I T L E E++Q+ Y G Y+PH+D+ S + G+R+ATVL Y+S + GG TVF A+ P ND L Sbjct: 318 PIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS---TILPTKNDAL 476
BLAST of FC921271 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 151 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAEGGETVFPN 585 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ Sbjct: 325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPD 473 The following BLAST results are available for this feature:
BLAST of FC921271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921271 ID=FC921271; Name=FC921271; organism=Citrus clementina; type=EST; length=663bpback to top |