FC921283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921283 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 62/169 (36.69%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 213 SKDVTINKSNDLSVRIFLPRQALDSSSSTNKIK------LPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYAD-LTSCFLMGTSAGGNIVYYAGLRAAAEAEYMLPLKIKGLILHSPFFGGLNXTE 698 S DV I++ +L R++ P A S S T+ +PVIV+FHGG F S +++ C + AVVVSV+YR APE+R P A+DD L W+ W+ + D FL G S+GGNIV+ +RA + + G IL +P FGG TE Sbjct: 65 SFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV--NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESR-----IDVLGNILLNPMFGGTERTE 226
BLAST of FC921283 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 58/168 (34.52%), Postives = 88/168 (52.38%), Query Frame = 3 Query: 228 INKSNDLSVRIFLPRQALDSSS----------STNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADL-TSCFLMGTSAGGNIVYYAGLRAAAEAEYMLPLKIKGLILHSPFFGGLNXTE 698 ++ + +L RI+ P L + ST +I +PV+++FHGG F S +++ FC + + VVVSVDYR +PEHR P A+DD AL+W+ + W+ + D +L G S+GGNI + +RA E +K+ G IL P FGG T+ Sbjct: 69 VDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEI-VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSR--VWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEG-----VKVLGNILLHPMFGGQERTQ 228
BLAST of FC921283 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 315 PVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLTS-CFLMGTSAGGNIVYYAGLRAAAEAEYMLPLKIKGLILHSPFFGGLNXTE 698 PVI++FHGG F+ S +++ C VVVSV+YR APEHR P A+DD AL W+++ ++ + D + FL G S+GGNI ++ +RAA E +K+ G IL + FGG TE Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG-----VKVCGNILLNAMFGGTERTE 235
BLAST of FC921283 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 63/186 (33.87%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 168 VAATLDPDDHQTIAVSKDVTINKSNDLSVRIFLPRQA--------LDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYAD-LTSCFLMGTSAGGNIVYYAGLRAAAEAEYMLPLKIKGLILHSPFFGGLNXTE 698 V A +P D S DV I++ +L R++ P A LD + +PVI++FHGG F S +++ C + VVVSV+YR APE+ P A+DD AL+W+ W+ + D FL G S+GGNI + LRA + + G IL +P FGG TE Sbjct: 53 VTANANPVDG---VFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV--NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESG-----IDVLGNILLNPMFGGNERTE 228
BLAST of FC921283 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 243 DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSN-IASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNY-ADLTSCFLMGTSAGGNIVYYAGLRAAAEAEYMLPLKIKGLILHSPFFGGLNXTE 698 D+ VR++LP++ ++ + ++YFHGGGF F DF + A+ AVVV VDYRLAP+H PA +D + A+ + + ++ +T Y D T + G S+GGN+ + +AE +K++ L+ + GL T+ Sbjct: 88 DIPVRLYLPKRKSET-------RRRAVIYFHGGGFC-FGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLL--EKILTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKHKIKMQVLL-----YPGLQITD 226 The following BLAST results are available for this feature:
BLAST of FC921283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921283 ID=FC921283; Name=FC921283; organism=Citrus clementina; type=EST; length=699bpback to top |