FC921285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 386.341 bits (991), Expect = 8.453e-107 Identity = 178/211 (84.36%), Postives = 198/211 (93.84%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 MQY++LGRSGLRVSQL+YGAWV+FGNQLDVKEAK+LLQ CRD GVNFFDNAEVYANGRAEEIMGQA+R+LGW+RSD+VVSTK+FWGGQGPNDKGLSRKHIVEG + SLKRLDMDYVDV+YCHRPD +TP+EETVRAMN+VID G AFYWGTSEWSAQQITEAW +A RLDLVGPIVEQPEYN+ SRHK E+E+LPLYS YG+ LTTWSPLA Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVEQPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLA 211
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.128e-65 Identity = 111/209 (53.11%), Postives = 155/209 (74.16%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL +DYVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY++ R K E + L+ G+ TWSPLA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLA 247
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.783e-64 Identity = 110/209 (52.63%), Postives = 155/209 (74.16%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY++ R K E + L+ G+ TWSPLA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLA 247
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.329e-64 Identity = 110/209 (52.63%), Postives = 155/209 (74.16%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY++ R K E + L+ G+ TWSPLA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLA 247
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.329e-64 Identity = 110/209 (52.63%), Postives = 155/209 (74.16%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L+ PI EQ EY++ R K E + L+ G+ TWSPLA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLA 247
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 3.972e-64 Identity = 110/209 (52.63%), Postives = 154/209 (73.68%), Query Frame = 2 Query: 89 YRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ D+G+N FD AEVYA G+AE ++G I++ GW+RS +V++TKIFWGG+ ++GLSRKHI+EG KASL+RL ++YVDV++ +RPD +TP+EETVRAM +VI++G A YWGTS WS+ +I EA+ +A + +L PI EQ EY++ R K E + L+ G+ TWSPLA Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLA 247
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.849e-64 Identity = 108/211 (51.18%), Postives = 155/211 (73.46%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G +++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG +ASL+RL ++YVDV++ +RPD +TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 281
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.156e-63 Identity = 108/211 (51.18%), Postives = 155/211 (73.46%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 281
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.156e-63 Identity = 108/211 (51.18%), Postives = 155/211 (73.46%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 281
BLAST of FC921285 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.156e-63 Identity = 108/211 (51.18%), Postives = 155/211 (73.46%), Query Frame = 2 Query: 83 MQYRHLGRSGLRVSQLAYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNVLSRHKGEAEYLPLYSNYGIXLTTWSPLA 715 M+YR+LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R K E + LY G+ TWSPLA Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLA 281 The following BLAST results are available for this feature:
BLAST of FC921285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921285 ID=FC921285; Name=FC921285; organism=Citrus clementina; type=EST; length=716bpback to top |