FC921287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921287 vs. ExPASy Swiss-Prot
Match: PEX10_ARATH (Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.509e-52 Identity = 112/162 (69.14%), Postives = 124/162 (76.54%), Query Frame = 1 Query: 223 QREMGS----GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPS 696 Q E GS G RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLYYVLTTGSGQQTLGEEYCDI QV GP L PTPARRALFI+YQTAVPYIAERIS+R A++ + E SDEF G S S I+ PS Sbjct: 11 QDEPGSSGFHGGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLYYVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQAVTFDE--SDEF-----FGDSHIHSPRMIDLPS 165
BLAST of FC921287 vs. ExPASy Swiss-Prot
Match: PEX10_DICDI (Peroxisome biogenesis factor 10 OS=Dictyostelium discoideum GN=pex10 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 211 NATHQREMGSGETRRFPPAA-QPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQ-RLPPTPARRALFIVYQTAVPYIAERISSRVASR 597 N + + + +P A QP+I+R+++KDE Y D C + ++ G R + QSE+KL+ +YY+LTT G QTLGEEYC++ ++ +P P R L+ + A PY+ ++ ++ R Sbjct: 62 NNNNNNNINRNNSNLYPSYADQPDILRSSQKDEYYKKLFEDQCFEMLTRITGPRFIMNRQSESKLLANTIYYLLTTMIGSQTLGEEYCNLRKIKDKTFSIPSIPDRIKLYFFHLLA-PYLIKKSLPKLFQR 191
BLAST of FC921287 vs. ExPASy Swiss-Prot
Match: PEX10_MOUSE (Peroxisome biogenesis factor 10 OS=Mus musculus GN=Pex10 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 265 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER 573 A PE++RAA+KDE Y + A +A L G + + ++ E +L+ + Y+ LTT +G QTLGEEY I QV Q+ P+ RRA + +PY+ ++ Sbjct: 4 AGAPEVIRAAQKDEYYLGGLRSAAGEALHSLAGAKKWLEWRKEIELLSDIAYFGLTTIAGYQTLGEEYVGIIQVDPSQQRVPSRLRRAALVALHAVLPYLLDK 106
BLAST of FC921287 vs. ExPASy Swiss-Prot
Match: PEX10_MACFA (Peroxisome biogenesis factor 10 OS=Macaca fascicularis GN=PEX10 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 265 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERI 576 A+ PE++RAA+KDE Y + A A L G R + ++ E +L+ + Y+ LTT +G QTLGEEY I +V Q P+ RR + + +PY+ +++ Sbjct: 6 ASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTTLAGYQTLGEEYVSIVRVDPSQTRVPSWLRRGVLVTLHAVLPYLLDKV 109
BLAST of FC921287 vs. ExPASy Swiss-Prot
Match: PEX10_HUMAN (Peroxisome biogenesis factor 10 OS=Homo sapiens GN=PEX10 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 265 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER 573 A+ PE++RAA+KDE Y + A A L G R + ++ E +L+ + Y+ LTT +G QTLGEEY I QV + P+ RR + + +PY+ ++ Sbjct: 6 ASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDK 108 The following BLAST results are available for this feature:
BLAST of FC921287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921287 ID=FC921287; Name=FC921287; organism=Citrus clementina; type=EST; length=698bpback to top |