FC921290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921290 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.781e-28 Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = -2 Query: 44 PLIPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWVHLQYNLISVIICS 274 PLI S RNLPDFKKSVKLKYVKLGYHYLITHGM+LFLSPLV+++AAQ+STFS DL LW HLQYNLISV++CS Sbjct: 8 PLIE--SSDRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVLVIAAQISTFSVTDLRSLWEHLQYNLISVVVCS 82
BLAST of FC921290 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.412e-17 Identity = 40/69 (57.97%), Postives = 53/69 (76.81%), Query Frame = -2 Query: 44 SRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWVHLQYNLISVIICS 250 +R LPDF +SV LKYVKLGYHYLI++ + L L PL V+++ + S + DL LW+HLQYNL+S+IICS Sbjct: 26 TRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFPLAVVISVEASQMNPDDLKQLWIHLQYNLVSIIICS 94
BLAST of FC921290 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.324e-15 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = -2 Query: 44 RNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWVHLQYNLISVIICS 247 R LP+F +SV +KYVKLGYHYLITH L L PL+ ++ ++S + DLY +W+HLQYNL++ I S Sbjct: 23 RKLPNFLQSVNMKYVKLGYHYLITHLFKLCLVPLMAVLVTEISRLTTDDLYQIWLHLQYNLVAFIFLS 90
BLAST of FC921290 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = -2 Query: 44 NQGKMTEPKP-NTPLIPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWVHLQYNLISVIICS 310 NQ + P P + P NLP+F SV+LKYVKLGYHYLI++ +++ L PL+ A LS+F+ DL L+ L+++ +S + + Sbjct: 4 NQNQPHRPVPVHVTNAEPNPNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIANLSSFTINDLSLLYNTLRFHFLSATLAT 93
BLAST of FC921290 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = -2 Query: 44 PSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWVHLQYNLISVIICS 253 P +P+F SVKLKYVKLGY YL+ H + L P++ IVA +L +++ ++W LQ++L+ V+ S Sbjct: 2 PQAPMPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIVAVELLRMGPEEILNVWNSLQFDLVQVLCSS 71 The following BLAST results are available for this feature:
BLAST of FC921290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921290 ID=FC921290; Name=FC921290; organism=Citrus clementina; type=EST; length=386bpback to top |