FC921298

Overview
NameFC921298
Unique NameFC921298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14286 contig Ccv1_Contig14286:1..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921298 vs. ExPASy Swiss-Prot
Match: UFOG5_MANES (Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.225e-61
Identity = 112/174 (64.37%), Postives = 144/174 (82.76%), Query Frame = 3
Query:  162 SSKPHAVLLSSPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFRSAISALKTTPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQNESFNIPGCRPLR 683
            +SKPH VLLSSPG+GH+IPVLELGKR+VTL NF VTIF+V S TSAAE ++L+SAM+ KLC +I++P P+IS L+DP+A V T + V+MREI+PAFR+A+SALK  P A+IVDLFGTESL +A+EL I KYVY+ +NAW +AL +Y P LDK V+G++V+Q E   IPGCRP+R
Sbjct:    7 NSKPHIVLLSSPGLGHLIPVLELGKRIVTLCNFDVTIFMVGSDTSAAEPQVLRSAMTPKLCEIIQLPPPNISCLIDPEATVCTRLFVLMREIRPAFRAAVSALKFRPAAIIVDLFGTESLEVAKELGIAKYVYIASNAWFLALTIYVPILDKEVEGEFVLQKEPMKIPGCRPVR 180          
BLAST of FC921298 vs. ExPASy Swiss-Prot
Match: HQGT_ARATH (Probable hydroquinone glucosyltransferase OS=Arabidopsis thaliana GN=At4g01070 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 61/178 (34.27%), Postives = 97/178 (54.49%), Query Frame = 3
Query:  162 SSKPHAVLLSSPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQ--TSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFRSAISALKT---TPTALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQNESFNIPGCRPL 680
            S  PH  ++ SPG+GH+IP++E  KRLV L+   VT FV+A +   S A+  +L S  SS     + +P  D++ L      + + IS+ +    P  R    +       PTAL+VDLFGT++  +A E  +P Y++  T A  ++ F++ P LD+TV  ++    E   +PGC P+
Sbjct:    4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVT-FVIAGEGPPSKAQRTVLDSLPSS--ISSVFLPPVDLTDL-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPV 177          
BLAST of FC921298 vs. ExPASy Swiss-Prot
Match: HQGT_RAUSE (Hydroquinone glucosyltransferase OS=Rauvolfia serpentina GN=AS PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  171 PHAVLLSSPGVGHVIPVLELGKRLVTLYNFQVTIFVVASQTSAAESKILQSAMSSKLCHVIEIPAPDISGLVDPDAAVVTIISVIMREIKPAFRSAISALKTTP--TALIVDLFGTESLAIAEELQIPKYVYVGTNAWCVALFVYAPTLDKTVQGQYVVQNESFNIPGCRPL 680
            PH  ++ +PG+GH+IP++E  KRLV  +NF VT  +          K    A+ + + +V+ +P      L   D  + T I + +    P  R A+  L  T    AL+VDLFGT++  +A E ++  Y++  T A C++LF + P LD+ V  +Y    E   IPGC P+
Sbjct:    5 PHIAMVPTPGMGHLIPLVEFAKRLVLRHNFGVTFIIPTDGPLPKAQKSFLDALPAGVNYVL-LPPVSFDDL-PADVRIETRICLTITRSLPFVRDAVKTLLATTKLAALVVDLFGTDAFDVAIEFKVSPYIFYPTTAMCLSLFFHLPKLDQMVSCEYRDVPEPLQIPGCIPI 174          
The following BLAST results are available for this feature:
BLAST of FC921298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
UFOG5_MANES2.225e-6164.37Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot... [more]
HQGT_ARATH2.251e-2134.27Probable hydroquinone glucosyltransferase OS=Arabi... [more]
HQGT_RAUSE1.117e-2033.14Hydroquinone glucosyltransferase OS=Rauvolfia serp... [more]
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Properties
Property NameValue
Genbank descriptionC32103D04EF RVDevelopN Citrus clementina cDNA clone C32103D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921298 ID=FC921298; Name=FC921298; organism=Citrus clementina; type=EST; length=683bp
CTCGCCGGGGAAAGATCGAAAATACTCTATCATAATAGCTCAAGTTCCGA
AGTTGGTAAGGGTATCCTTCAAAGTTCAAATCCTGTAATTAGTTCTATAT
ATCTTGTTCTGTAATTAGTTATATATTTCTTGTTCTCTGATCTAAAGCCA
TGGAGAGCTCAAGCTCAAAGCCACATGCAGTACTACTATCAAGTCCCGGC
GTGGGCCACGTCATTCCCGTCTTAGAGCTCGGTAAACGCCTTGTCACTCT
CTACAACTTCCAAGTAACAATCTTTGTTGTTGCCTCTCAAACATCAGCCG
CAGAATCAAAAATCCTCCAGTCAGCCATGAGTTCAAAGCTTTGCCACGTC
ATCGAAATCCCAGCACCAGATATCTCCGGCCTCGTTGACCCAGACGCTGC
AGTGGTTACAATAATTTCAGTAATCATGCGCGAAATAAAGCCAGCTTTCC
GCTCTGCAATATCTGCTCTGAAGACTACCCCGACTGCTCTGATCGTGGAC
CTCTTTGGAACTGAATCTTTGGCGATTGCTGAAGAGCTTCAGATTCCTAA
ATACGTGTACGTGGGCACCAATGCTTGGTGTGTTGCACTCTTTGTTTATG
CTCCAACTCTAGATAAGACAGTGCAAGGACAGTATGTTGTTCAAAACGAG
TCGTTTAACATCCCGGGTTGCAGGCCCCTTCGA
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