FC921303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 6.133e-100 Identity = 169/196 (86.22%), Postives = 179/196 (91.33%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 MAQILAPS QWQMR K S ASP+T+ WSSLLMKQNKK SSAKFRVLA+KS+ ST+NRLE LLNLDITP+TDKIIAEYIWIGGTGID+RSKS+TISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICD YTPAGEPIPTNKRHRAAE+FSN +V AEVPWFGIEQEYTLLQ Sbjct: 1 MAQILAPSTQWQMRFTKSSRHASPITSNTWSSLLMKQNKK---TSSAKFRVLAVKSDGSTINRLEGLLNLDITPFTDKIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHRAAEVFSNPRVIAEVPWFGIEQEYTLLQ 193 HSP 2 Score: 40.817 bits (94), Expect = 6.133e-100 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L TNV WPLGWPVG YPG Sbjct: 191 LLQTNVNWPLGWPVGGYPG 209
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 1.946e-98 Identity = 161/196 (82.14%), Postives = 179/196 (91.33%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 MAQILAPS QWQMR+ K S A+P+T+KMWSSL+MKQ KK + SAKFRV+A+ SE+ T+NR+EDLLNLDITP+TD IIAEYIWIGGTGID+RSKS+TISKPV HPSE+PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILV+CD YTPAGEPIPTNKRHRAAEIFSN KV AE+PW+GIEQEYTLLQ Sbjct: 1 MAQILAPSTQWQMRITKTSPCATPITSKMWSSLVMKQTKKVAH--SAKFRVMAVNSENGTINRVEDLLNLDITPFTDSIIAEYIWIGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHRAAEIFSNPKVEAEIPWYGIEQEYTLLQ 194 HSP 2 Score: 42.743 bits (99), Expect = 1.946e-98 Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L TNVKWPLGWPVG YPG Sbjct: 192 LLQTNVKWPLGWPVGGYPG 210
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 3.311e-98 Identity = 163/197 (82.74%), Postives = 179/197 (90.86%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 MAQILAPS+QWQMR K S S MT+KMW SL +KQNKK RSS K+R LA+KSED T+NR+EDLLNLD+TPYTDKIIAEYIWIGGTGID+RSKS+TISKPVEHPSELPKWNYDGSSTGQAPG+DSEVILYPQAIFKDPFRGGNNILVICDTYTP GEPIPTNKRH+AA+IFS++KV EVPWFGIEQEYTL+QQ Sbjct: 1 MAQILAPSVQWQMRFTKNSTEVSSMTSKMWGSLFLKQNKKAPARSSTKYRALAVKSEDGTINRMEDLLNLDVTPYTDKIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGDDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHKAAQIFSDAKVLGEVPWFGIEQEYTLMQQ 197 HSP 2 Score: 33.113 bits (74), Expect = 3.311e-98 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V WPLGW VG YPG Sbjct: 194 LMQQDVNWPLGWNVGGYPG 212
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.142e-94 Identity = 159/196 (81.12%), Postives = 177/196 (90.31%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 MAQILAPS+Q Q R+ K S +A+P+++KMWSSL+MKQNKK SAKFRV+A+ S T+NR+EDLLNLDITP+TD IIAEYIWIGGTGID+RSKS+TISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICD YTP GEPIPTNKRH+AAEIFSN KV AE+PW+GIEQEYTLLQ Sbjct: 1 MAQILAPSIQCQTRITKTSPLATPISSKMWSSLVMKQNKKVAR--SAKFRVMAINS--GTINRVEDLLNLDITPFTDSIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQGEPIPTNKRHKAAEIFSNPKVEAEIPWYGIEQEYTLLQ 192 HSP 2 Score: 40.817 bits (94), Expect = 2.142e-94 Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L T+VKWPLGWPVG YPG Sbjct: 190 LLQTDVKWPLGWPVGGYPG 208
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.726e-89 Identity = 150/197 (76.14%), Postives = 175/197 (88.83%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 MAQILA S QMR+PK+S++ + ++K+WSS+++KQ K+ N+ FRVLAL+S++STVNR+E LLNLD PY+D+IIAEYIWIGG+GID+RSKS+TI KPVE PSELPKWNYDGSSTGQAPGEDSEVILYPQAIF+DPFRGGNNILVICDT+TPAGEPIPTNKR +AAEIFSN KVS EVPWFGIEQEYTLLQQ Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS-SSKLWSSVVLKQKKQSNNKVRG-FRVLALQSDNSTVNRVETLLNLDTKPYSDRIIAEYIWIGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIFSNKKVSGEVPWFGIEQEYTLLQQ 195 HSP 2 Score: 40.4318 bits (93), Expect = 9.726e-89 Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L NVKWPLGWPVGA+PG Sbjct: 192 LLQQNVKWPLGWPVGAFPG 210
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 2.582e-86 Identity = 145/196 (73.98%), Postives = 174/196 (88.78%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQ 683 MAQILA S QMR+ K S+IAS +K+W+S+++KQ K+ +++ + F+V+AL+S++ST+NR+E LLNLD P+TD+IIAEYIWIGG+GID+RSKS+T+ KPVE PSELPKWNYDGSSTGQAPGEDSEVILYPQAIF+DPFRGGNNILVICDTYTPAGEPIPTNKR RAAEIFSN KV+ E+PWFGIEQEYTLLQ Sbjct: 1 MAQILAASPTCQMRLTKPSSIAS---SKLWNSVVLKQKKQSSSKVRS-FKVMALQSDNSTINRVESLLNLDTKPFTDRIIAEYIWIGGSGIDLRSKSRTLEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTYTPAGEPIPTNKRARAAEIFSNKKVNEEIPWFGIEQEYTLLQ 192 HSP 2 Score: 40.0466 bits (92), Expect = 2.582e-86 Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L NV WPLGWPVGAYPG Sbjct: 190 LLQPNVNWPLGWPVGAYPG 208
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.827e-76 Identity = 133/200 (66.50%), Postives = 161/200 (80.50%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTT--KMWSSLLMKQNKKGTNRSSAKFRVLALKSEDS-TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 MAQ + P+MQ Q+ + A+ ++W + T R ++ FRV+A+ +E + V R+E LLN+D TP+TDKIIAEYIW+GGTGID+RSKS+TISKPVE PSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILV+CDTYTPAGEPIPTNKR+RAA++FS+ KV ++VPWFGIEQEYTLLQ+ Sbjct: 1 MAQAVVPAMQCQVGAVRARPAAAAAAAGGRVWGV-------RRTGRGTSGFRVMAVSTETTGVVTRMEQLLNMDTTPFTDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVPWFGIEQEYTLLQR 193 HSP 2 Score: 36.5798 bits (83), Expect = 2.827e-76 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V WPLGWPVG YPG Sbjct: 190 LLQRDVNWPLGWPVGGYPG 208
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 8.933e-75 Identity = 130/198 (65.66%), Postives = 159/198 (80.30%), Query Frame = 3 Query: 96 MAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDS-TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 MAQ + P+MQ ++ + + ++WS+ + + G +S F+V+A+ + + V RLE LLN+D TPYTDK+IAEYIW+GG+GID+RSKS+TISKPVE PSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNN+LVICDTYTP GEP+PTNKRHRAA+IFS+ KV +VPWFGIEQEYTLLQ+ Sbjct: 1 MAQAVVPAMQCRVGVKAAAG-------RVWSA---GRTRTGRGGASPGFKVMAVSTGSTGVVPRLEQLLNMDTTPYTDKVIAEYIWVGGSGIDIRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNVLVICDTYTPQGEPLPTNKRHRAAQIFSDPKVGEQVPWFGIEQEYTLLQK 188 HSP 2 Score: 35.039 bits (79), Expect = 8.933e-75 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V WPLGWPVG +PG Sbjct: 185 LLQKDVNWPLGWPVGGFPG 203
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 6.258e-73 Identity = 120/155 (77.42%), Postives = 142/155 (91.61%), Query Frame = 3 Query: 225 RSSAKFRVLALKSEDS-TVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 R+++ F+VLAL E + + R++ LL++D TP+TDKIIAEYIW+GG+GID+RSKS+TISKPVE PSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTP GEPIPTNKRH AA+IFS+ KV+++VPWFGIEQEYTL+Q+ Sbjct: 45 RATSGFKVLALGPETTGVIQRMQQLLDMDTTPFTDKIIAEYIWVGGSGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHMAAQIFSDPKVTSQVPWFGIEQEYTLMQR 199 HSP 2 Score: 36.5798 bits (83), Expect = 6.258e-73 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +V WPLGWPVG YPG Sbjct: 196 LMQRDVNWPLGWPVGGYPG 214
BLAST of FC921303 vs. ExPASy Swiss-Prot
Match: GLN11_ARATH (Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.637e-64 Identity = 104/134 (77.61%), Postives = 122/134 (91.04%), Query Frame = 3 Query: 285 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQ 686 + DL+NL+++ TDKIIAEYIW+GG+G+DMRSK++T+ PV PS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR GNNILV+CD YTPAGEPIPTNKRH AA++FSN V+AEVPW+GIEQEYTLLQ+ Sbjct: 4 VSDLINLNLSDSTDKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSNPDVAAEVPWYGIEQEYTLLQK 137 HSP 2 Score: 36.965 bits (84), Expect = 1.637e-64 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 674 LTSTNVKWPLGWPVGAYPG 730 L +VKWP+GWP+G YPG Sbjct: 134 LLQKDVKWPVGWPIGGYPG 152 The following BLAST results are available for this feature:
BLAST of FC921303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921303 ID=FC921303; Name=FC921303; organism=Citrus clementina; type=EST; length=731bpback to top |