FC921346

Overview
NameFC921346
Unique NameFC921346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13432 contig Ccv1_Contig13432:1335..2049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.261e-51
Identity = 98/217 (45.16%), Postives = 147/217 (67.74%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R +  ++L +AT+    EN+IG+GG   VY+G L DG ++AVK +L       KEF +E+E+I  + HKN++ LLG+C E    +LVYDF+  G+LE+ +HG+  D +   W  R  + +G+A+ L YLH G   +V+HRD+KSSNILL   +  ++SDFGLAK   + SS++T T V GTFGY+APEY   G +N+K D+Y+FG++++E++TGR P
Sbjct:  140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVT-TRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNP 355          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.037e-51
Identity = 102/215 (47.44%), Postives = 143/215 (66.51%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            F  +DL  AT+ F   N++G+GG   VY+G L +G E+AVK +L       KEF +E+E I  + HKN++ LLG+C E  + +LVY++++ G+LE+ LHG  +      W  R K+  G A+AL YLH     +V+HRD+K+SNIL+ D+F  +LSDFGLAK   +  SHIT T V GTFGY+APEY   G +N+K D+Y+FGV+LLE +TGR P
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHIT-TRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP 384          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.578e-51
Identity = 102/221 (46.15%), Postives = 151/221 (68.33%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDV-IKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAK-WASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPYKH 709
            R+F+++++ SAT NF  + +IG+G    VY+G LPDGK++AVK+      +    F+ E+ +++ + H+N++S  GFC+E    +LVY++LS GSL ++L+G +    +  W  R KVA+  A+ L+YLH+GS  R+IHRDVKSSNILL  D   ++SDFGL+K +    +SHIT T V GT GYL PEY+   ++ +K DVY+FGVVLLEL+ GR+P  H
Sbjct:  594 RIFSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHIT-TVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSH 811          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.122e-50
Identity = 106/214 (49.53%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   56 LFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            +F Y +L SAT +F   N +G+GG   VYKG L DG+ +AVK+L       K +FV EI  I+++ H+N++ L G CFE  + +LVY++L  GSL++ L G+K       WS RY++ +GVA  L YLH  ++ R++HRDVK+SNILL     PQ+SDFGLAK      +HI+ T VAGT GYLAPEY M G + +K DVYAFGVV LEL++GR
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKT--LHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 891          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 106/213 (49.77%), Postives = 140/213 (65.73%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPSEDVIK-EFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            F Y +L SAT +F   N +G+GG   VYKG L DG+E+AVK+L       K +FV EI  I+ + H+N++ L G C+E  + LLVY++L  GSL++ L G K       WS RY++ +GVA  L YLH  +  R++HRDVK+SNILL     P++SDFGLAK      +HI+ T VAGT GYLAPEY M G + +K DVYAFGVV LEL++GR
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKT--LHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 890          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49
Identity = 101/215 (46.98%), Postives = 143/215 (66.51%), Query Frame = 2
Query:   59 FNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPD-GKELAVKIL-KPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            F +++L +AT NF  +  +G+GG  +VYKG L   G+ +AVK L +      +EF++E+ +++ LHH N+++L+G+C + +  LLVY+F+  GSLE++LH    D  A  W+ R K+A G A+ LE+LH  +   VI+RD KSSNILL + F P+LSDFGLAK   T       T V GT+GY APEY M G++  K DVY+FGVV LEL+TGRK
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRK 288          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 97/214 (45.33%), Postives = 135/214 (63.08%), Query Frame = 2
Query:   62 NYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKPS-EDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            +Y DLL +T++F   N+IG GG   VYK  LPDGK++A+K L      + +EF  E+E ++   H N++ L GFCF  N+ LL+Y ++  GSL+  LH     PA   W  R ++A G A+ L YLH G    ++HRD+KSSNILL ++F   L+DFGLA+  S   +H++ TD+ GT GY+ PEY        K DVY+FGVVLLELLT ++P
Sbjct:  723 SYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVS-TDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRP 935          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 96/217 (44.24%), Postives = 142/217 (65.44%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVK-ILKPSEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKP 700
            R   + DLL AT+ F  ++LIG GG   VYK  L DG  +A+K ++  S    +EF+ E+E I  + H+N++ LLG+C   +  LLVY+F+  GSLE+ LH  KK      WS R K+A+G A  L +LH   +  +IHRD+KSSN+LL ++ E ++SDFG+A+  S   +H++ + +AGT GY+ PEY+   + + K DVY++GVVLLELLTG++P
Sbjct:  869 RKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRP 1085          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 95/216 (43.98%), Postives = 143/216 (66.20%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRK 697
            R+FN ++L  AT NF    ++G+GG   VYKG L DG+ +AVK  K   ED ++EF+ E+ I++ ++H+NI+ LLG C E +  +LVY+F+  G+L E+LH +  D     W  R ++A+ +A AL YLHS ++  + HRD+KS+NI+L +    ++SDFG ++  +   +H+T T V+GT GY+ PEYF   +  DK DVY+FGVVL EL+TG K
Sbjct:  419 RVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLT-TVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEK 633          
BLAST of FC921346 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.056e-48
Identity = 99/215 (46.05%), Postives = 145/215 (67.44%), Query Frame = 2
Query:   53 RLFNYQDLLSATSNFLAENLIGKGGSSQVYKGCLPDGKELAVKILKP-SEDVIKEFVLEIEIITTLHHKNIISLLGFCFEDNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGR 694
            R F+  +L  AT NF A  +IG GG   VY G L DG ++AVK   P SE  I EF  EI++++ L H++++SL+G+C E++ ++LVY+F+S G   ++L+G  K+ A   W +R ++ +G A  L YLH+G+AQ +IHRDVKS+NILL +    +++DFGL+K  +   +H++ T V G+FGYL PEYF   ++ DK DVY+FGVVLLE L  R
Sbjct:  512 RYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG--KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVS-TAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCAR 723          
The following BLAST results are available for this feature:
BLAST of FC921346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1154_ARATH2.261e-5145.16Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH5.037e-5147.44Probable receptor-like protein kinase At2g42960 OS... [more]
Y5487_ARATH6.578e-5146.15Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH1.122e-5049.53Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH1.465e-5049.77Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH6.157e-4946.98Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PSKR1_ARATH8.041e-4945.33Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
BRI1_ARATH1.050e-4844.24Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
WAKLJ_ARATH1.791e-4843.98Wall-associated receptor kinase-like 10 OS=Arabido... [more]
Y4391_ARATH3.056e-4846.05Probable receptor-like protein kinase At4g39110 OS... [more]

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Properties
Property NameValue
Genbank descriptionC32103H07EF RVDevelopN Citrus clementina cDNA clone C32103H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921346 ID=FC921346; Name=FC921346; organism=Citrus clementina; type=EST; length=715bp
GGAACTGCCAAAAGAATTGGAAGGTCTTCATGAGAAATATTCGGCAACTT
GCAGATTGTTCAATTACCAGGATCTCCTCTCAGCAACATCTAATTTCTTG
GCCGAGAATCTGATAGGGAAAGGAGGCAGCAGTCAGGTTTACAAAGGTTG
CCTTCCTGATGGAAAGGAACTTGCAGTGAAAATCTTGAAGCCATCTGAAG
ATGTAATAAAAGAGTTTGTTTTGGAAATTGAGATTATTACTACATTACAT
CACAAAAACATTATTTCCCTTTTGGGATTCTGCTTTGAGGACAATAACCT
GCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAGAAGAGAACCTTC
ATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGTGAGAGATATAAG
GTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCACAGTGGCAGTGC
TCAACGTGTGATCCACAGGGATGTTAAATCATCAAATATATTACTGTCAG
ATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCCAAGTGGGCATCA
ACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGGAACCTTTGGCTA
CCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATGACAAGATTGATG
TCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACTGGAAGGAAGCCC
TATAAGCACGATCAT
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