FC921348

Overview
NameFC921348
Unique NameFC921348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.423e-50
Identity = 108/233 (46.35%), Postives = 146/233 (62.66%), Query Frame = 2
Query:   44 MMLRNAVLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNP----SFKLTDNKFADLSNEEFISTYLGY-NKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            M +  A+ +  LL +L + A   S     +   +     +  W  ++ + Y +  E +RR+  +  N++YID  N+       SF+L  N+FADL+NEE+  TYLG  NKP  E    S +YL      LP SVDWR +GAV  +KDQG CGSCWAFSA+AAVEGIN++ TG L+SLSEQELVDCD  S  +GCNGG M+ AF+FI   GG+ TEDDYPY+GK++RC  ++ N
Sbjct:    1 MRISMALAAAALLLLLSLAAADMSIVSYGERSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERK-VSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCD-TSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKN 231          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.784e-49
Identity = 110/228 (48.25%), Postives = 142/228 (62.28%), Query Frame = 2
Query:   62 VLSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLG----YNKPYNEPSWPSVQYL-----GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            VLSL L  VLG+ A ++          +S+ + +E W   +  SR  G   E  +RF ++ +NV ++   N  +  +KL  NKFAD++N EF STY G    ++K +      S  ++      +PASVDWRK+GAVT VKDQGQCGSCWAFS + AVEGIN++KT KLVSLSEQELVDCD   E QGCNGG ME AFEFI + GG+TTE +YPY  +   C   K N
Sbjct:   10 VLSLSL--VLGV-ANSFDFHEKDLESEESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVN 230          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.430e-49
Identity = 98/193 (50.78%), Postives = 128/193 (66.32%), Query Frame = 2
Query:  155 ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKP-YNEPSWPSVQY-----LGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTNI 715
            E FE+W+ ++S+ Y S +E   RF ++  N+ +ID  N++  S+ L  N+FADL++EEF   YLG  KP ++    PS  +       LP SVDWRK+GAV PVKDQGQCGSCWAFS VAAVEGIN++ TG L SLSEQEL+DCD      GCNGG M+ AF++I   GG+  EDDYPY  +   CQ  K ++
Sbjct:   49 ELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFN-SGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDV 240          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.101e-48
Identity = 98/201 (48.76%), Postives = 129/201 (64.18%), Query Frame = 2
Query:  143 QSMEERFENWLKQY--SREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYN---------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +S+ + +E W   +  SR  G   E  +RF ++ +N+ ++   N  +  +KL  NKFAD++N EF STY G            P+   ++   + + +P SVDWRK+GAVT VKDQGQCGSCWAFS V AVEGIN++KT KLV+LSEQELVDCD   E QGCNGG ME AFEFI + GG+TTE +YPY+ +   C   K N
Sbjct:   34 ESLWDLYERWRSHHTVSRSLG---EKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCD-KEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVN 230          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.321e-48
Identity = 92/190 (48.42%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSW-----PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +E+WL +Y + Y S  EW+RRF I+   +++ID  N+  N S+K+  N+FADL++EEF STYLG+    N+        P V  + LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC      +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D  N
Sbjct:   42 YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV-LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQN 230          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 187.578 bits (475), Expect = 6.041e-47
Identity = 91/190 (47.89%), Postives = 124/190 (65.26%), Query Frame = 2
Query:  161 FENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQ-NPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSW-----PSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +E+WL +Y + Y S  EW+RRF I+   +++ID  N+  N S+K+  N+FADL++EEF STYL +    N+        P V  + LP+ VDWR  GAV  +K QG+CG CWAFSA+A VEGINK+ TG L+SLSEQEL+DC      +GCNGGY+   F+FI   GG+ TE++YPY  ++  C  D  N
Sbjct:   42 YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQV-LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQN 230          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.916e-46
Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 2
Query:  134 YDPQSME------ERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYN---------KPYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDK 706
            Y P+ +E      E FENW+  + + Y + +E   RF ++  N+++ID  N +  S+ L  N+FADLS+EEF   YLG           + Y E ++  V+   +P SVDWRK+GAV  VK+QG CGSCWAFS VAAVEGINK+ TG L +LSEQEL+DCD  +   GCNGG M+ AFE+I K GG+  E+DYPY  +   C+  K
Sbjct:   36 YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVE--AVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD-TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQK 238          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.943e-45
Identity = 95/199 (47.74%), Postives = 125/199 (62.81%), Query Frame = 2
Query:  143 QSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNK---------PYNEPSWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +S+   +E W   ++    S  E Q+RF ++  N  ++   N  +  +KL  NKFAD++N EF +TY G            P    ++   +   +PASVDWRK+GAVT VKDQGQCGSCWAFS + AVEGIN++KT KLVSLSEQELVDCD + + QGCNGG M+ AFEFI + GG+TTE +YPY   +  C   K N
Sbjct:   32 ESLWGLYERWRSHHTVSR-SLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKEN 228          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.655e-45
Identity = 98/219 (44.75%), Postives = 137/219 (62.56%), Query Frame = 2
Query:   65 LSLFLLWVLGIPAGAWSEGYPQKYDPQSMEERFENWLKQYSREYGSEDEWQRRFGIYSSNVQYIDYINSQNP-SFKLTDNKFADLSNEEFISTYLGYNKPYN---EP--SWPSVQYLGLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTD 703
            L LFL  +   P+ A  +   +  DP  M +RFE W+ +Y R Y  +DE  RRF I+ +NV++I+  NS+N  S+ L  N+F D++  EF++ Y G + P N   EP  S+  V    +P S+DWR  GAV  VK+Q  CGSCW+F+A+A VEGI K+KTG LVSLSEQE++DC V+    GC GG++ KA++FI    GVTTE++YPY      C  +
Sbjct:   10 LFLFLCAMWASPSAASRD---EPNDP--MMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVS---YGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNAN 220          
BLAST of FC921348 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.645e-45
Identity = 91/191 (47.64%), Postives = 123/191 (64.40%), Query Frame = 2
Query:  161 FENWLKQYSREYGSED--EWQRRFGIYSSNVQYIDYINSQNPSFKLTDNKFADLSNEEFISTYLGYNKPYNEPSWPSVQYLG-----LPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELVDCDVNSEXQGCNGGYMEKAFEFITKIGGVTTEDDYPYRGKNDRCQTDKTN 712
            +E WL ++ +        E  RRF I+  N++++D  N +N S++L   +FADL+N+E+ S YLG           S++Y       LP S+DWRK+GAV  VKDQG CGSCWAFS + AVEGIN++ TG L++LSEQELVDCD  S  +GCNGG M+ AFEFI K GG+ T+ DYPY+G +  C   + N
Sbjct:   50 YEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKN 239          
The following BLAST results are available for this feature:
BLAST of FC921348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
ORYA_ORYSJ3.423e-5046.35Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSEP_VIGMU3.784e-4948.25Vignain OS=Vigna mungo PE=1 SV=1[more]
XCP1_ARATH8.430e-4950.78Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSEP_PHAVU1.101e-4848.76Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
ACTN_ACTDE9.321e-4848.42Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH6.041e-4747.89Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
XCP2_ARATH3.916e-4646.60Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CYSEP_RICCO1.943e-4547.74Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
BROM1_ANACO5.655e-4544.75Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
RD21A_ARATH9.645e-4547.64Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC32103H09EF RVDevelopN Citrus clementina cDNA clone C32103H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921348 ID=FC921348; Name=FC921348; organism=Citrus clementina; type=EST; length=733bp
GATCTATACTAATCTACATCTCAAGATAGCAATAGATATGCGCATGATGT
TGAGAAATGCTGTGCTATCTCTTTTTCTTTTGTGGGTTCTCGGGATACCT
GCAGGGGCATGGTCAGAGGGCTATCCACAAAAGTACGACCCACAATCCAT
GGAGGAGAGGTTCGAAAACTGGCTAAAACAATATAGCCGAGAGTATGGGA
GTGAAGATGAATGGCAACGGCGATTTGGAATCTACTCGTCCAATGTTCAG
TACATTGACTACATCAATTCTCAAAACCCATCATTCAAGCTAACAGACAA
TAAATTTGCAGACCTGTCAAATGAAGAGTTCATTTCTACCTACTTGGGAT
ATAATAAACCGTACAACGAACCAAGTTGGCCAAGCGTACAATATTTGGGT
TTGCCAGCTAGCGTAGATTGGAGAAAGGAAGGTGCTGTAACTCCAGTCAA
AGATCAAGGCCAATGTGGAAGTTGTTGGGCGTTCTCTGCAGTGGCAGCTG
TGGAAGGCATCAACAAATTAAAAACAGGAAAATTGGTATCTCTGTCAGAG
CAGGAATTGGTGGACTGTGATGTTAACAGCGAANACCAAGGCTGCAATGG
TGGATACATGGAGAAAGCATTTGAATTCATCACAAAGATTGGTGGAGTCA
CCACAGAGGATGATTATCCTTACAGAGGCAAAAATGACCGCTGTCAGACA
GATAAAACAAACATCATGCAGTGACCATACTGG
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