FC921358

Overview
NameFC921358
Unique NameFC921358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14310 contig Ccv1_Contig14310:10..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 252.677 bits (644), Expect = 1.234e-66
Identity = 134/214 (62.62%), Postives = 152/214 (71.03%), Query Frame = 2
Query:   11 KNLTGLPSLISRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGSAXXXXXXXXXXXRAHSR-GEVDP 649
            K+LT L SL SRNIS+ EPSPDFPFFM+RN SAR LQYNQI+ FPPTI+L  N L G IW EFGNLKKLHVFDLK N LSG IPS LSGMTSLE LDLSNN LSG+IP+            VA N+L+G IPSGGQFQTFPNSSF+ N+LCGEHR+ C+   ES  +   K+SRR++   +GMAIGI FGS            RA  R GEVDP
Sbjct:  481 KSLTKLESLTSRNISVNEPSPDFPFFMKRNESARALQYNQIFGFPPTIELGHNNLSGPIWEEFGNLKKLHVFDLKWNALSGSIPSSLSGMTSLEALDLSNNRLSGSIPVSLQQLSFLSKFSVAYNNLSGVIPSGGQFQTFPNSSFESNHLCGEHRFPCSEGTESALI---KRSRRSRGGDIGMAIGIAFGSVFLLTLLSLIVLRARRRSGEVDP 691          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.332e-57
Identity = 120/213 (56.34%), Postives = 145/213 (68.08%), Query Frame = 2
Query:   14 NLTGLPSLISRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGSAXXXXXXXXXXXRAHSRGEVDP 649
            +LT L SL+S+  ++EEPSPDFPFF ++N +A GLQYNQ  SFPP IDLS N L+GSIWPEFG+L++LHV +LK+NNLSG IP+ LSGMTSLE LDLS+NNLSG IP             VA N L+G IP+G QFQTFPNSSF+GN  LCGEH   C I  +S    SA KS++N   IV +A+G   G+            R  SRGEVDP
Sbjct:  492 SLTSLQSLVSKENAVEEPSPDFPFFKKKNTNAGGLQYNQPSSFPPMIDLSYNSLNGSIWPEFGDLRQLHVLNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIPTGVQFQTFPNSSFEGNQGLCGEHASPCHITDQSPH-GSAVKSKKNIRKIVAVAVGTGLGTVFLLTVTLLIILRTTSRGEVDP 703          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.377e-33
Identity = 85/200 (42.50%), Postives = 114/200 (57.00%), Query Frame = 2
Query:   17 LTGLPSLISRNISLEE--PSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNK-----------YTIVGMAIGIT 574
            +T L +LI  N +  +   S   P +++RN S+ GL YNQ+  FPP+I L+ NRL+G+I PE G LK+LH+ DL  NN +G IP  +SG+ +LE LDLS N+L G+IP+            VA N LTG IPSGGQF +FP+SSF+GN  LC      C +   S  +     SRRN               + +AIGIT
Sbjct:  494 ITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSNGLPYNQVSRFPPSIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPSGGQFYSFPHSSFEGNLGLCRAIDSPCDV-LMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAIGIT 692          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.861e-30
Identity = 78/192 (40.62%), Postives = 104/192 (54.17%), Query Frame = 2
Query:   11 KNLTGLPSLISRNI--SLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFG 580
            K L  L +L+S+    + E    + P F+  N      QYNQ+ S PPTI +  N L G+I  E G LK LH+ +L  NN SG IP ELS +T+LE LDLSNNNLSG IP             VANN L+G IP+G QF TFP ++F+GN L        + D          K + N+  ++G+ +G+ FG
Sbjct:  537 KELFQLRALMSQKAYDATERNYLELPVFVNPNNVTTNQQYNQLSSLPPTIYIKRNNLTGTIPVEVGQLKVLHILELLGNNFSGSIPDELSNLTNLERLDLSNNNLSGRIPWSLTGLHFLSYFNVANNTLSGPIPTGTQFDTFPKANFEGNPLLCGGVLLTSCDPTQHSTTKMGKGKVNRTLVLGLVLGLFFG 728          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.299e-19
Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  152 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSA---KKSRRNKYTIVG-MAIGITF 577
            +DLS N+L+GSI  E G +  L + +L HN+LSG IP +L G+ ++  LDLS N  +G IP             ++NN+L+G IP    F TFP+  F  N+LCG   Y   I   SG    A   +KS R + ++ G +A+G+ F
Sbjct:  668 LDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANNSLCG---YPLPIPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLF 810          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19
Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  152 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSA---KKSRRNKYTIVG-MAIGITF 577
            +DLS N+L+GSI  E G +  L + +L HN+LSG IP +L G+ ++  LDLS N  +G IP             ++NN+L+G IP    F TFP+  F  N+LCG   Y   +   SG    A   +KS R + ++ G +A+G+ F
Sbjct:  668 LDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANNSLCG---YPLPLPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLF 810          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.024e-17
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 2
Query:  152 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVG-MAIGITF 577
            +D+S N L G I  E G++  L + +L HN++SG IP E+  +  L  LDLS+N L G IP             ++NN+L+G IP  GQF+TFP + F  N  LCG     C      G     +   R   ++ G +A+G+ F
Sbjct:  659 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRPASLAGSVAMGLLF 802          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.529e-16
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  155 DLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCG 466
            D+S N + G I P +GN+  L V +L HN ++G IP    G+ ++  LDLS+NNL G +P             V+NN+LTG IP GGQ  TFP S +  N+ LCG
Sbjct:  645 DISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGGLKAIGVLDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTFPVSRYANNSGLCG 749          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 2
Query:  152 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCGEHRYSCTIDRESGQVKSAKKSRRNKYTI-VGMAIGITF 577
            +DLS N + GSI   +G +  L V +L HN L+G IP    G+ ++  LDLS+N+L G +P             V+NN+LTG IP GGQ  TFP + +  N+ LCG     C+    SG   +   +   K +I  GM+ GI F
Sbjct:  644 LDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCGVPLPPCS----SGSRPTRSHAHPKKQSIATGMSAGIVF 783          
BLAST of FC921358 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 56/160 (35.00%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   95 RNVSARGLQYNQIWS-FPPTID---------LSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNK 541
            + V    L Y++I    PP I          L  N L G+I    GN   L    L+ N  +GPIP+E+  +  L+ LD+S+N LSG IP             V+NN L G+IPS G    F  +SF GN NLCG+H        +SG   S  +S +N+
Sbjct:   74 KRVITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLCGKH-VDVVCQDDSGNPSSHSQSGQNQ 232          
The following BLAST results are available for this feature:
BLAST of FC921358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PSKR1_ARATH1.234e-6662.62Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA2.332e-5756.34Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PSKR2_ARATH1.377e-3342.50Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PSYR1_ARATH1.861e-3040.63Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRI1_SOLLC4.299e-1938.36Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE7.334e-1937.67Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_ARATH4.024e-1735.42Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRL1_ARATH1.529e-1642.86Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH4.449e-1637.50Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
FEI1_ARATH6.425e-1535.00LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC32104A07EF RVDevelopN Citrus clementina cDNA clone C32104A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921358 ID=FC921358; Name=FC921358; organism=Citrus clementina; type=EST; length=649bp
GAGAGATTCAAAAAATCTAACTGGATTACCAAGCCTCATCAGTAGGAATA
TCTCTTTGGAGGAGCCTTCCCCAGATTTCCCCTTTTTCATGAGAAGGAAT
GTTAGTGCAAGAGGGCTGCAGTATAATCAAATTTGGAGCTTTCCTCCAAC
TATTGACCTTAGCCTTAACCGTCTTGATGGGTCAATTTGGCCGGAGTTTG
GGAATCTGAAGAAGCTCCATGTGTTTGATTTGAAGCATAATAATTTATCT
GGACCAATTCCTAGTGAATTGTCTGGGATGACAAGCTTGGAGACGCTGGA
TTTGTCCAATAACAATCTATCAGGTGCTATACCTATTTCATTGGAAAAGC
TCAGCTTTCTTTCTAAGTTTAGTGTTGCCAATAATCATCTCACTGGGAGG
ATCCCGTCGGGAGGCCAGTTTCAGACTTTTCCAAATTCAAGCTTTGACGG
AAATAATCTTTGTGGTGAGCATCGGTACTCTTGTACAATTGATAGGGAAA
GTGGCCAGGTCAAGTCAGCAAAAAAATCTAGGAGAAACAAATACACCATT
GTGGGAATGGCTATTGGGATCACATTTGGGTCAGCTTTTCTTCTTATCCT
GATCTTCATGATTTTGCTACGGGCACATAGCCGGGGAGAGGTTGATCCT
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