FC921369

Overview
NameFC921369
Unique NameFC921369
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA4_ARATH (Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.244e-108
Identity = 196/230 (85.22%), Postives = 212/230 (92.17%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLPLDKHTLV+ LRK  GEVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK NADVII+DDNF TIVNVA+WGRAVYINIQKFVQFQLTVNVVAL+INFVSAC +GSAPLTAVQLLWVNMIMDTLGALALATEPP+EGLMKR P+A+  SFITK MWRNI GQS+YQLI+L  LNF GK +L L G D+TAVLNTVIFNSFVFCQVFNEINSRE+EKINVFKGMF+SW+
Sbjct:  725 SLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWV 953
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA11_ARATH (Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.461e-108
Identity = 195/230 (84.78%), Postives = 212/230 (92.17%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLPLDKHTLV  LRK  GEVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK NADVII+DDNF+TIVNVAKWGRAVYINIQKFVQFQLTVNVVAL+INFVSAC +GSAPLTAVQLLWVNMIMDTLGALALATEPP+EGLMKR P+ +  SFIT+ MWRNIIGQSIYQLI+L  LNF GKQIL L+G D+T VLNT+IFNSFVFCQVFNE+NSRE+EKINVF+GMF SW+
Sbjct:  722 SLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWV 950
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA5_ORYSJ (Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.740e-105
Identity = 183/230 (79.57%), Postives = 212/230 (92.17%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLPLDKHTLVT LR  F EVV+VTGDGTNDAPALHEADIGL+MGIAGTEVAK +ADVI+LDDNF+TI+NVA+WGRAVYINIQKFVQFQLTVN+VALVINFVSAC +GSAPLTAVQLLWVNMIMDTLGALALATEPP++ +MKRPPV KGESFITKVMWRNI+GQS+YQL +L AL F G+ +L + G+D+ +++NT+IFNSFVFCQVFNEINSREM+KINVF+G+  +W+
Sbjct:  711 SLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWI 940
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA4_ORYSJ (Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.720e-104
Identity = 182/230 (79.13%), Postives = 211/230 (91.74%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLPLDKHTLVT LR  F EVV+VTGDGTNDAPALHEADIGL+MGIAGTEVAK +ADVI+LDDNF+TI+NVA+WGRAVYINIQKFVQFQLTVN+VALVINFVSAC  GSAPLTAVQLLWVNMIMDTLGALALATEPP++ +MKRPPV KGESFITK MWRNI+GQS+YQL +L AL F G+++L + G+D+ +++NT+IFNSFVFCQVFNEINSREM+KINVF+G+  +W+
Sbjct:  733 SLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWI 962
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA3_ORYSJ (Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.041e-102
Identity = 179/230 (77.83%), Postives = 207/230 (90.00%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLPLDKHTLVT LR  F EVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK NADVII+DDNFSTI+NVAKWGR+VYINIQKFVQFQLTVNVVAL++NF+SA  +GSAPLT VQLLWVN+IMDTLGALALATEPP++ +MKRPPV +G++FITKVMWRNI+GQSIYQL++L  L   GK +L ++G  A ++LNT +FN+FVFCQVFNE+NSREMEKINVF G+F SW+
Sbjct:  736 SLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIVQLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGVLLLRGKSLLQINGPQADSLLNTFVFNTFVFCQVFNEVNSREMEKINVFSGIFSSWI 965
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA7_ARATH (Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 1.977e-97
Identity = 177/230 (76.96%), Postives = 201/230 (87.39%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            S P+DKHTLV QLR TF EVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK  ADVIILDDNFSTIV VAKWGR+VYINIQKFVQFQLTVNVVAL++NF SAC +GSAPLTAVQLLWVNMIMDTLGALALATEPP+  LMKR PV +  +FIT  MWRNI+GQ++YQ II+  L   GK + GL GSD+T VLNT+IFN FVFCQVFNE++SREME+I+VFKG+ D+++
Sbjct:  731 SSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYV 960
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA2_ARATH (Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.582e-97
Identity = 176/230 (76.52%), Postives = 202/230 (87.83%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            S P+DKHTLV QLR TF EVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK +ADVIILDDNFSTIV VAKWGR+VYINIQKFVQFQLTVNVVALV+NF SAC +GSAPLTAVQLLWVNMIMDTLGALALATEPP++ LMKR PV +  +FIT  MWRNI+GQ++YQ I++  L   GK + GL G D+T +LNT+IFN FVFCQVFNEI+SREME+I+VFKG+ D+++
Sbjct:  730 SSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEIDVFKGILDNYV 959
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA6_ORYSJ (Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.405e-97
Identity = 167/230 (72.61%), Postives = 202/230 (87.83%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            SLP+DK+ LVT L+  + EVVAVTGDGTNDAPALHE+DIGL+MGI GTEVAK +ADVII+DDNF TIVNVA+WGRAVY+NIQKFVQFQLTVN+VAL++NFVSAC  GSAPLTAVQLLWVNMIMDTLGALALATEPP++ +MKRPPV +G++FIT++MWRNI+GQ +YQL++L  L   GK++L + G  +   +NT+IFNSFVFCQVFNEIN REMEKINV +G+F +W+
Sbjct:  715 SLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAMGITGTEVAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNILGQGLYQLLVLATLMVIGKKLLSIEGPQSDKTINTLIFNSFVFCQVFNEINCREMEKINVLQGIFRNWI 944
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA1_ORYSJ (Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.405e-97
Identity = 176/230 (76.52%), Postives = 198/230 (86.09%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            S PLDKHTLV  LR TF EVVAVTGDGTNDAPALHEADIGL+MGIAGTEVAK +ADVIILDDNFSTIV VAKWGR+VY+NIQKFVQFQLTVNVVAL++NF SAC +G+APLTAVQLLWVNMIMDTLGALALATEPP++ LMKR PV +   FIT VMWRNI+GQS YQ I++  L   GK + GL G DA  VLNT+IFNSFVFCQVFNEI+SREMEKINV +G+  +++
Sbjct:  733 SSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFYQFIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQVFNEISSREMEKINVLRGILKNYV 962
[Close]
BLAST of FC921369 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3)

HSP 1 Score: 347.051 bits (889), Expect = 5.385e-95
Identity = 172/230 (74.78%), Postives = 199/230 (86.52%), Query Frame = 3 
Query:    3 SLPLDKHTLVTQLRKTFGEVVAVTGDGTNDAPALHEADIGLSMGIAGTEVAKGNADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNVVALVINFVSACASGSAPLTAVQLLWVNMIMDTLGALALATEPPHEGLMKRPPVAKGESFITKVMWRNIIGQSIYQLIILVALNFDGKQILGLSGSDATAVLNTVIFNSFVFCQVFNEINSREMEKINVFKGMFDSWL 692
            S P+DKHTLV  LR  F EVVAVTGDGTNDAPALHEADIGL+MGI+GTEVAK +ADVIILDDNFSTIV VAKWGR+VYINIQKFVQFQLTVNVVAL++NF+SAC +G+APLTAVQLLWVNMIMDTLGALALATEPP + LMKR PV +  +FI+ VMWRNI+GQS+YQL+I+  L   GK + GL G D+   LNT+IFN FVFCQVFNEI+SREMEKI+VFKG+  +++
Sbjct:  733 SSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYV 962
The following BLAST results are available for this feature:
BLAST of FC921369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ACA4_ARATH7.244e-10885.22Calcium-transporting ATPase 4, plasma membrane-typ... [more]
ACA11_ARATH9.461e-10884.78Putative calcium-transporting ATPase 11, plasma me... [more]
ACA5_ORYSJ5.740e-10579.57Probable calcium-transporting ATPase 5, plasma mem... [more]
ACA4_ORYSJ3.720e-10479.13Probable calcium-transporting ATPase 4, plasma mem... [more]
ACA3_ORYSJ2.041e-10277.83Calcium-transporting ATPase 3, plasma membrane-typ... [more]
ACA7_ARATH1.977e-9776.96Putative calcium-transporting ATPase 7, plasma mem... [more]
ACA2_ARATH2.582e-9776.52Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA6_ORYSJ4.405e-9772.61Probable calcium-transporting ATPase 6, plasma mem... [more]
ACA1_ORYSJ4.405e-9776.52Calcium-transporting ATPase 1, plasma membrane-typ... [more]
ACA1_ARATH5.385e-9574.78Calcium-transporting ATPase 1, chloroplastic OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC32104B06EF RVDevelopN Citrus clementina cDNA clone C32104B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921369 ID=FC921369; Name=FC921369; organism=Citrus clementina; type=EST; length=693bp
GTTCTTTGCCTTTGGACAAGCACACCTTGGTAACTCAGTTGAGGAAAACA
TTTGGGGAGGTTGTTGCAGTGACAGGTGATGGAACCAATGATGCTCCTGC
TTTGCATGAAGCAGATATTGGACTTTCAATGGGCATAGCTGGGACAGAGG
TTGCCAAAGGAAATGCTGATGTTATCATCTTAGATGATAATTTTTCAACG
ATTGTAAATGTTGCCAAGTGGGGACGTGCAGTATATATAAACATTCAGAA
GTTTGTGCAGTTCCAGTTAACAGTTAATGTTGTCGCACTTGTGATCAACT
TCGTTTCTGCATGTGCCTCAGGATCTGCTCCTCTCACGGCTGTACAATTG
CTTTGGGTCAACATGATTATGGACACTCTTGGAGCACTAGCACTGGCTAC
AGAACCTCCTCATGAAGGATTAATGAAAAGGCCCCCTGTTGCGAAGGGTG
AAAGTTTCATCACCAAGGTCATGTGGAGGAACATAATTGGTCAGAGCATT
TATCAGCTAATCATCCTGGTAGCTCTCAATTTTGACGGGAAGCAGATACT
GGGGCTTAGTGGTTCAGATGCCACTGCTGTACTCAATACGGTGATATTCA
ACTCCTTTGTGTTTTGCCAGGTCTTCAATGAAATAAATAGTCGGGAAATG
GAGAAGATAAATGTGTTCAAAGGCATGTTCGACAGCTGGCTGT
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