FC921377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921377 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.536e-34 Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 339 LMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGRSSKTNMVDYLSKKRLYARLCSPSPFDGGNKEMWLX*NTGGLCVSISSR 623 + LDPPEIC+LARLNR FR ASSADFIWESKLP+NY+ I KV + T ++ KK LYA+L P+ FD G KE+W+ NTG LC+SISS+ Sbjct: 37 MTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLI----KKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSK 127 HSP 2 Score: 38.5058 bits (88), Expect = 4.536e-34 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 620 QALAITGIDDRRYWTHISTED 682 +AL ITGIDDRRYW+HI T++ Sbjct: 127 KALRITGIDDRRYWSHIPTDE 147 HSP 3 Score: 34.2686 bits (77), Expect = 4.536e-34 Identity = 17/36 (47.22%), Postives = 25/36 (69.44%), Query Frame = 1 Query: 235 MGANVSGIVAD-SNGDELSSLRPRLSDMPESCVALV 339 MGAN+SG + D++ S + RL D+PE+CVAL+ Sbjct: 1 MGANISGGSPEFDRNDDVYSRKLRLVDLPENCVALI 36
BLAST of FC921377 vs. ExPASy Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 6.695e-26 Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 339 LMHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGRSSKTNMVDYLSKKRLYARLCSPSPFDGGNKEMWLX*NTGGLCVSISSR 623 L +LDP EIC+ ++LN AF GAS ADF+WESKLP +Y+ I++K+LG + D L K+ ++ L + FD GNK+ W+ TGGLC+ S++ Sbjct: 38 LQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILG-----SFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAK 127 HSP 2 Score: 37.7354 bits (86), Expect = 6.695e-26 Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 620 QALAITGIDDRRYWTHISTED 682 + L+ITGIDDRRYW+HI ++D Sbjct: 127 KGLSITGIDDRRYWSHIPSDD 147 HSP 3 Score: 28.4906 bits (62), Expect = 6.695e-26 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 292 LRPRLSDMPESCVALV 339 L+P L D+PESCVAL+ Sbjct: 22 LQPGLGDLPESCVALI 37
BLAST of FC921377 vs. ExPASy Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.462e-25 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 345 HLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGRSSKTNMVDYLSKKRLYARLCSPSPFDGGNKEMWLX*NTGGLCVSISSR 623 +LDP EIC+ ++LNRAFRGAS AD +WESKLP NY+ +++K+LG + L K+ LYA L + FD K++W+ T G+C+SIS++ Sbjct: 42 NLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG-----GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAK 129 HSP 2 Score: 37.7354 bits (86), Expect = 1.462e-25 Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 620 QALAITGIDDRRYWTHISTED 682 + L+ITGIDDRRYW+HI T++ Sbjct: 129 KGLSITGIDDRRYWSHIPTDE 149 HSP 3 Score: 26.9498 bits (58), Expect = 1.462e-25 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 292 LRPRLSDMPESCVALV 339 L+P L D+PE+CVA++ Sbjct: 24 LKPGLGDLPEACVAII 39
BLAST of FC921377 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.191e-25 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 342 MHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGRSSKTNMVDYLSKKRLYARLCSPSPFDGGNKEMWLX*NTGGLCVSISSR 623 M+L PPEIC LA LNR+FRGA+S+D +WE KLP NYQ ++D + LSKK ++A L P PFD NKE+W+ TG +C++IS+R Sbjct: 34 MYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLL-----PPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISAR 122 HSP 2 Score: 32.3426 bits (72), Expect = 3.191e-25 Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 620 QALAITGIDDRRYWTHISTED 682 + ++ITGI+DRRYW I TE+ Sbjct: 122 RGMSITGIEDRRYWNWIPTEE 142 HSP 3 Score: 29.6462 bits (65), Expect = 3.191e-25 Identity = 16/42 (38.10%), Postives = 27/42 (64.29%), Query Frame = 1 Query: 235 MGANVSGIVADSNGDELSSLRPRLSDMPESCVALV*CIWTHL 360 MG+++S + +NG ++ P L D+PESCVA C++ +L Sbjct: 1 MGSSLSNLNDGTNG---LAMGPGLGDIPESCVA---CVFMYL 36
BLAST of FC921377 vs. ExPASy Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.510e-24 Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 342 MHLDPPEICKLARLNRAFRGASSADFIWESKLPSNYQFIVDKVLGRSSKTNMVDYL--SKKRLYARLCSPSPFDGGNKEMWLX*NTGGLCVSISSR 623 M+++PPEIC LAR+N++F AS +D +WE KLPSNY+F+V ++L + + D L KK +YARLC P+ FD G KE WL +G + ++IS + Sbjct: 34 MYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPK 129 HSP 2 Score: 38.1206 bits (87), Expect = 1.510e-24 Identity = 17/28 (60.71%), Postives = 23/28 (82.14%), Query Frame = 2 Query: 620 QALAITGIDDRRYWTHISTED--LGSIS 697 +A+ ITGIDDRRYW HIS+++ GSI+ Sbjct: 129 KAMKITGIDDRRYWEHISSDESRFGSIT 156 The following BLAST results are available for this feature:
BLAST of FC921377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921377 ID=FC921377; Name=FC921377; organism=Citrus clementina; type=EST; length=707bpback to top |