FC921385

Overview
NameFC921385
Unique NameFC921385
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:109..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.220e-60
Identity = 108/143 (75.52%), Postives = 122/143 (85.31%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            ++Q++ D+V KLPGQNFNV+FAHYSG+V  NE+ GRALFYW  E VED  SKPLVLWLNGGPGCSS+AYGEAEEIGPFHIK D KTLYLN YSWNQ ANILFLD+PVGVG+SYSNTSSD+ +NGDKRTAEDSL F     +RF
Sbjct:   30 LSQKEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERF 172          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.750e-51
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 3
Query:  273 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            V ++PGQ F+ +FAHY+GYVTV+E+ G ALFYWF E   DP SKPL+LWLNGGPGCSSIA+G  EE+GPFH+  D K +++NPYSWNQVANILFLDSPVGVG+SYSNTS+DI +NGD+RTA+DSL F     +RF
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERF 135          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.328e-50
Identity = 93/143 (65.03%), Postives = 115/143 (80.42%), Query Frame = 3
Query:  255 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            +Q+ DR+  LPG+  +V+F+H+SGY+TVNE +GRALFYW  E    E+P+SKPLVLWLNGGPGCSS+AYG AEEIGPF I PD KTLY NPYSWN++AN+LFL+SP GVGFSYSNT+SD+   GD+RTAED+  F     +RF
Sbjct:   24 EQEKDRIFHLPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGGPGCSSVAYGAAEEIGPFRINPDGKTLYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERF 166          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.280e-48
Identity = 92/145 (63.45%), Postives = 110/145 (75.86%), Query Frame = 3
Query:  249 VAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVED--VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            V +Q  DR+  LPGQ  NV+F  YSGYVTV+EE GRALFYW VE     DP S+PLVLWLNGGPGCSS+AYG AEEIGPF +  D KTL+   Y+WN++AN+LFL+SP GVGFSYSNT+SD+   GD+RTAEDS  F  +  +RF
Sbjct:   26 VEEQLRDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERF 170          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.196e-46
Identity = 88/140 (62.86%), Postives = 107/140 (76.43%), Query Frame = 3
Query:  237 STDPVAQQKL-DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            S+D   +QK+ D++  LPGQ  N+NF+ +SGYVTV+  +GRALFYW  E      +KPLVLWLNGGPGCSSIAYG +EE+GPF + PD KTL LN Y+WN+VAN+LFLDSP GVGFSY+NTSSD    GDKRT ED+  F
Sbjct:   25 SSDDAKEQKMKDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRF 164          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.616e-43
Identity = 89/149 (59.73%), Postives = 107/149 (71.81%), Query Frame = 3
Query:  234 FSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK-PDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            F +  +A Q+ DRV +LPGQ   V F  Y+GYVTVNE  GRALFYWF E  ++P  KP++LWLNGGPGCSSI +G AEE+GPF  +   +  L LNPYSWN+ AN+LFL+SPVGVGFSY+NTS DI   GD  TA DS NF  +  KRF
Sbjct:   39 FRSRVLAAQRADRVKELPGQP-PVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRF 186          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.020e-43
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = 3
Query:  231 AFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNFY*SG*KRF 677
            A S+    +Q+ DR+  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E     P +KPL+LWLNGGPGCSSIAYG +EEIGPF I      LYLN +SWN  AN+LFL+SPVGVGFSY+NTSSD   +GD+RTA+++L F  S   RF
Sbjct:   17 ATSSTSTKEQEEDRIKALPGQP-KVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRF 165          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 6.789e-42
Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = 3
Query:  255 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            + + DR+  LPGQ  NV F  +SGYVTV++ SGR+LFYW  E  + P SKPLV+WLNGGPGCSS+AYG +EEIGPF I      LYLN ++WN ++N+LFL++P GVGFSY+N SSD+   GD+RTA+DSL F
Sbjct:   32 EAEADRITSLPGQP-NVTFEQFSGYVTVDKLSGRSLFYWLTEASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQF 163          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.860e-42
Identity = 82/140 (58.57%), Postives = 103/140 (73.57%), Query Frame = 3
Query:  237 STDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            S+    +Q+ DR+  LPGQ   V F+ YSGYV VN+  GRALFYW  E     P +KPL+LWLNGGPGCSSIAYG +EEIGPF I      LYLN ++WN+ AN+LFL+SP GVG+SY+NTSSD+  +GD+RTA+D+L F
Sbjct:   21 SSSSSREQEKDRIKALPGQP-KVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIF 159          

HSP 2 Score: 21.557 bits (44), Expect = 8.860e-42
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  650 FLLKWLETFSQF 685
            FL+KWL  F Q+
Sbjct:  159 FLIKWLSRFPQY 170          
BLAST of FC921385 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41
Identity = 80/139 (57.55%), Postives = 101/139 (72.66%), Query Frame = 3
Query:  237 STDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEDVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDEKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITANGDKRTAEDSLNF 653
            S+  + +Q+ D +  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E      +KPL+LWLNGGPGCSSI YG +EEIGPF I      LYLN ++WN  ANILFL+SP GVGFSY+NTSSD+  +GD+RTA+++L F
Sbjct:   19 SSSSLREQEEDMIKALPGQP-QVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIF 156          
The following BLAST results are available for this feature:
BLAST of FC921385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP29_ARATH7.220e-6075.52Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU2.750e-5168.15Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP26_ARATH2.328e-5065.03Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP27_ARATH8.280e-4863.45Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP28_ARATH1.196e-4662.86Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP34_ARATH1.616e-4359.73Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP22_ARATH8.020e-4358.67Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP25_ARATH6.789e-4259.40Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP24_ARATH8.860e-4258.57Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP23_ARATH1.158e-4157.55Putative serine carboxypeptidase-like 23 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC32104D03EF RVDevelopN Citrus clementina cDNA clone C32104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921385 ID=FC921385; Name=FC921385; organism=Citrus clementina; type=EST; length=687bp
GAGAAATCAAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGA
AAAAAAAAAAAAGTTCTCAGAACACTATCATTGGCTCCAACGTTTTTGCT
TGATTATGTCTTCTTTATAAGTCGTAGTACCCCAGTACACTAAACCATAT
AAAAAATGGCTTATAATCCAAAAGGAGCTTCCTTTCTTGTTCAAATCTTG
TTCATTTTCATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGT
TGCCCAGCAAAAACTTGACAGAGTTGGGAAGCTGCCTGGGCAAAATTTCA
ATGTCAACTTTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCC
GGGAGGGCTCTCTTTTATTGGTTCGTTGAAGATGTTGAAGATCCTGATTC
CAAGCCTCTTGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTG
CTTATGGGGAGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGAG
AAGACCTTATACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCT
GTTTCTTGATTCCCCCGTTGGCGTTGGTTTTTCATATTCAAATACATCCT
CTGATATTACGGCCAATGGTGATAAAAGGACTGCGGAGGATTCCCTAAAT
TTTTACTAAAGTGGTTAGAAACGTTTTCACAATTTAA
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