FC921438

Overview
NameFC921438
Unique NameFC921438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig171 contig Ccv1_Contig171:44..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 7.848e-105
Identity = 188/236 (79.66%), Postives = 199/236 (84.32%), Query Frame = 3
Query:    6 TERVTISKXXXXXXXXXXXXXXXXXXXXXCRPHNPTHFPDGSLDKPVNYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTY 713
            T RV+IS+                     CRPHNP  F DGSLDKPV YSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIG+GASSTVYKCVLKNCKPVAIKRLYSH PQ +K+FETELE + SIKHRNLVSLQ YSLS  G+LLFYD++ENGSLWD+LHGPTKKK LDWDTRLKIA GAAQGLAYLHHDCSPRIIHRDVKSSNILLDKD EA LTDFGIAKSLCVSKS+TSTY
Sbjct:  573 TVRVSISRAAILGIAIGGLVILLMVLIAACRPHNPPPFLDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTY 808          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.103e-82
Identity = 141/184 (76.63%), Postives = 170/184 (92.39%), Query Frame = 3
Query:  162 KLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTY 713
            KLVILHM+MA+H ++DIMR+TENL+EK+IIGYGASSTVYKC LK+ +P+AIKRLY+ YP  L+EFETELET+GSI+HRN+VSL GY+LS +GNLLFYD+MENGSLWD+LHG  KK KLDW+TRLKIA+GAAQGLAYLHHDC+PRIIHRD+KSSNILLD++FEAHL+DFGIAKS+  SK++ STY
Sbjct:  625 KLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTY 808          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.051e-81
Identity = 139/184 (75.54%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  162 KLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTY 713
            KLVILHM+MA+H ++DIMR+TENL EKYIIGYGASSTVYKC  K  +P+AIKR+Y+ YP   +EFETELET+GSI+HRN+VSL GY+LS  GNLLFYD+MENGSLWD+LHGP KK KLDW+TRLKIA+GAAQGLAYLHHDC+PRIIHRD+KSSNILLD +FEA L+DFGIAKS+  +K+Y STY
Sbjct:  628 KLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTY 811          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKR-LYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSG--NLLFYDFMENGSLWDILHGPT-----KKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL 683
            +EDIM  T NLSE+++IG G S  VYK  L+N + VA+K+ L+       K F  E++T+G I+HR+LV L GY  S S   NLL Y++M+NGS+WD LH        KKK LDW+ RL+IA+G AQG+ YLHHDC P I+HRD+KSSN+LLD + EAHL DFG+AK L
Sbjct:  941 WEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVL 1109          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKR-LYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSG--NLLFYDFMENGSLWDILHGP--TKKKK-LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL 683
            ++DIM  T  L+E+++IG G S  VYK  LKN + +A+K+ L+       K F  E++T+G+I+HR+LV L GY  S +   NLL Y++M NGS+WD LH    TKKK+ L W+TRLKIALG AQG+ YLH+DC P I+HRD+KSSN+LLD + EAHL DFG+AK L
Sbjct:  938 WDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKIL 1104          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 88/182 (48.35%), Postives = 127/182 (69.78%), Query Frame = 3
Query:  165 LVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            +V+ H ++  +  +DI++  E+L+E++IIG G   TVYK  + +    A+KR+        + FE ELE +GSIKHR LV+L+GY  S +  LL YD++  GSL + LH   + ++LDWD+R+ I +GAA+GLAYLHHDCSPRIIHRD+KSSNILLD + EA ++DFG+AK L   +S+ +T
Sbjct:  283 IVMFHGDLP-YASKDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH--KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 461          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 3
Query:  204 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTST 710
            +DI++  E L+E++IIG G   TVYK  + + K  A+KR+        + FE ELE +GSIKHR LV+L+GY  S +  LL YD++  GSL + LH   + ++LDWD+R+ I +GAA+GL+YLHHDCSPRIIHRD+KSSNILLD + EA ++DFG+AK L   +S+ +T
Sbjct:  297 KDIIKKLEMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH--ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 463          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 86/179 (48.04%), Postives = 119/179 (66.48%), Query Frame = 3
Query:  204 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYP-------QCLKEFETELETVGSIKHRNLVSLQG--YSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAK--SLCVSKSYTS 707
            +DI+  T+   + YI+G GA  TVYK V+ + K +A+K+L S+              F  E+ T+G I+HRN+V L    Y   S+ NLL Y++M  GSL ++LHG  K   +DW TR  IALGAA+GLAYLHHDC PRIIHRD+KS+NIL+D++FEAH+ DFG+AK   + +SKS ++
Sbjct:  810 KDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGG-KSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSA 987          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 83/170 (48.82%), Postives = 114/170 (67.06%), Query Frame = 3
Query:  201 YEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKK-KLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTS 707
            + D+++ T       +IG G    VYK +LK+   VAIK+L     Q  +EF  E+ET+G IKHRNLV L GY       LL Y+FM+ GSL D+LH P K   KL+W TR KIA+G+A+GLA+LHH+CSP IIHRD+KSSN+LLD++ EA ++DFG+A+ +    ++ S
Sbjct:  873 FADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLS 1042          
BLAST of FC921438 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39
Identity = 79/159 (49.69%), Postives = 103/159 (64.78%), Query Frame = 3
Query:  210 IMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRL-YSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSSSGNLLFYDFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL 683
            ++  TENL++KY+IG GA  T+YK  L   K  A+K+L ++           E+ET+G ++HRNL+ L+ + L     L+ Y +MENGSL DILH     K LDW TR  IA+G A GLAYLH DC P I+HRD+K  NILLD D E H++DFGIAK L
Sbjct:  809 VLEATENLNDKYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLL 967          
The following BLAST results are available for this feature:
BLAST of FC921438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 310
Match NameE-valueIdentityDescription
ERECT_ARATH7.848e-10579.66LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH1.103e-8276.63LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH6.051e-8175.54LRR receptor-like serine/threonine-protein kinase ... [more]
GSO1_ARATH1.318e-4353.85LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH7.231e-4253.29LRR receptor-like serine/threonine-protein kinase ... [more]
FEI2_ARATH1.044e-4048.35LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH1.364e-4050.89LRR receptor-like serine/threonine-protein kinase ... [more]
Y2317_ARATH3.038e-4048.04Probable leucine-rich repeat receptor-like protein... [more]
BRI1_ARATH5.182e-4048.82Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
RPK1_IPONI1.508e-3949.69Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]

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Properties
Property NameValue
Genbank descriptionC32104H12EF RVDevelopN Citrus clementina cDNA clone C32104H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921438 ID=FC921438; Name=FC921438; organism=Citrus clementina; type=EST; length=715bp
ATCCAACGGAACGAGTTACAATTTCTAAAGCAGCTATTCTCGGAATTGCT
CTCGGTGCACTTGTAATTCTTCTCATGATCCTGGTGGCAGCATGCCGACC
ACACAATCCTACTCATTTTCCAGATGGATCACTTGACAAACCAGTTAATT
ACTCCACTCCCAAGTTAGTGATCCTTCACATGAACATGGCACTTCATGTG
TATGAAGACATTATGAGGATGACCGAGAATTTGAGTGAGAAGTACATAAT
TGGTTATGGGGCATCGAGTACAGTGTACAAGTGTGTTCTTAAAAATTGTA
AGCCAGTGGCTATCAAGCGACTTTACTCTCACTATCCACAGTGCTTGAAG
GAATTTGAGACAGAGCTTGAGACGGTTGGGAGCATCAAGCACCGAAATCT
GGTCAGCCTCCAAGGATACTCGTTGTCCTCCTCAGGGAACCTTCTCTTCT
ATGATTTTATGGAAAATGGTAGTCTTTGGGATATTCTTCATGGTCCAACA
AAGAAGAAAAAGCTTGACTGGGACACTCGACTGAAAATAGCACTAGGAGC
TGCACAAGGGCTAGCGTATTTACACCATGATTGTAGTCCTCGAATCATCC
ACCGGGATGTGAAGTCCTCTAATATTCTATTGGACAAGGATTTTGAAGCC
CATCTCACAGATTTTGGAATTGCCAAAAGTTTATGTGTGTCCAAGTCGTA
TACATCTACTTACAT
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