FC921448

Overview
NameFC921448
Unique NameFC921448
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14310 contig Ccv1_Contig14310:1..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 256.144 bits (653), Expect = 1.137e-67
Identity = 136/216 (62.96%), Postives = 154/216 (71.30%), Query Frame = 2
Query:    8 GEIPKNLTGLPSLISRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGSAXXXXXXXXXXXRAHSR-GEV 652
            GEIPK+LT L SL SRNIS+ EPSPDFPFFM+RN SAR LQYNQI+ FPPTI+L  N L G IW EFGNLKKLHVFDLK N LSG IPS LSGMTSLE LDLSNN LSG+IP+            VA N+L+G IPSGGQFQTFPNSSF+ N+LCGEHR+ C+   ES  +   K+SRR++   +GMAIGI FGS            RA  R GEV
Sbjct:  477 GEIPKSLTKLESLTSRNISVNEPSPDFPFFMKRNESARALQYNQIFGFPPTIELGHNNLSGPIWEEFGNLKKLHVFDLKWNALSGSIPSSLSGMTSLEALDLSNNRLSGSIPVSLQQLSFLSKFSVAYNNLSGVIPSGGQFQTFPNSSFESNHLCGEHRFPCSEGTESALI---KRSRRSRGGDIGMAIGIAFGSVFLLTLLSLIVLRARRRSGEV 689          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.808e-58
Identity = 122/216 (56.48%), Postives = 147/216 (68.06%), Query Frame = 2
Query:    8 GEIPKNLTGLPSLISRNISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGSAXXXXXXXXXXXRAHSRGEV 652
            GEIP +LT L SL+S+  ++EEPSPDFPFF ++N +A GLQYNQ  SFPP IDLS N L+GSIWPEFG+L++LHV +LK+NNLSG IP+ LSGMTSLE LDLS+NNLSG IP             VA N L+G IP+G QFQTFPNSSF+GN  LCGEH   C I  +S    SA KS++N   IV +A+G   G+            R  SRGEV
Sbjct:  487 GEIPHSLTSLQSLVSKENAVEEPSPDFPFFKKKNTNAGGLQYNQPSSFPPMIDLSYNSLNGSIWPEFGDLRQLHVLNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIPTGVQFQTFPNSSFEGNQGLCGEHASPCHITDQSPH-GSAVKSKKNIRKIVAVAVGTGLGTVFLLTVTLLIILRTTSRGEV 701          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35
Identity = 88/206 (42.72%), Postives = 117/206 (56.80%), Query Frame = 2
Query:    8 GEIPKNLTGLPSLISRNISLEE--PSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNK-----------YTIVGMAIGIT 583
            G IP  +T L +LI  N +  +   S   P +++RN S+ GL YNQ+  FPP+I L+ NRL+G+I PE G LK+LH+ DL  NN +G IP  +SG+ +LE LDLS N+L G+IP+            VA N LTG IPSGGQF +FP+SSF+GN  LC      C +   S  +     SRRN               + +AIGIT
Sbjct:  488 GAIPVAITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSNGLPYNQVSRFPPSIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPSGGQFYSFPHSSFEGNLGLCRAIDSPCDV-LMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAIGIT 692          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33
Identity = 81/196 (41.33%), Postives = 108/196 (55.10%), Query Frame = 2
Query:    8 GEIPKNLTGLPSLISRNI--SLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFG 589
            GE+PK L  L +L+S+    + E    + P F+  N      QYNQ+ S PPTI +  N L G+I  E G LK LH+ +L  NN SG IP ELS +T+LE LDLSNNNLSG IP             VANN L+G IP+G QF TFP ++F+GN L        + D          K + N+  ++G+ +G+ FG
Sbjct:  533 GELPKELFQLRALMSQKAYDATERNYLELPVFVNPNNVTTNQQYNQLSSLPPTIYIKRNNLTGTIPVEVGQLKVLHILELLGNNFSGSIPDELSNLTNLERLDLSNNNLSGRIPWSLTGLHFLSYFNVANNTLSGPIPTGTQFDTFPKANFEGNPLLCGGVLLTSCDPTQHSTTKMGKGKVNRTLVLGLVLGLFFG 728          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  161 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSA---KKSRRNKYTIVG-MAIGITF 586
            +DLS N+L+GSI  E G +  L + +L HN+LSG IP +L G+ ++  LDLS N  +G IP             ++NN+L+G IP    F TFP+  F  N+LCG   Y   I   SG    A   +KS R + ++ G +A+G+ F
Sbjct:  668 LDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANNSLCG---YPLPIPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLF 810          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  161 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSA---KKSRRNKYTIVG-MAIGITF 586
            +DLS N+L+GSI  E G +  L + +L HN+LSG IP +L G+ ++  LDLS N  +G IP             ++NN+L+G IP    F TFP+  F  N+LCG   Y   +   SG    A   +KS R + ++ G +A+G+ F
Sbjct:  668 LDLSYNKLEGSIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMIPESAPFDTFPDYRFANNSLCG---YPLPLPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLF 810          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 2
Query:  161 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVG-MAIGITF 586
            +D+S N L G I  E G++  L + +L HN++SG IP E+  +  L  LDLS+N L G IP             ++NN+L+G IP  GQF+TFP + F  N  LCG     C      G     +   R   ++ G +A+G+ F
Sbjct:  659 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRPASLAGSVAMGLLF 802          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  164 DLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCG 475
            D+S N + G I P +GN+  L V +L HN ++G IP    G+ ++  LDLS+NNL G +P             V+NN+LTG IP GGQ  TFP S +  N+ LCG
Sbjct:  645 DISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGGLKAIGVLDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTFPVSRYANNSGLCG 749          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 2
Query:  161 IDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGNN-LCGEHRYSCTIDRESGQVKSAKKSRRNKYTI-VGMAIGITF 586
            +DLS N + GSI   +G +  L V +L HN L+G IP    G+ ++  LDLS+N+L G +P             V+NN+LTG IP GGQ  TFP + +  N+ LCG     C+    SG   +   +   K +I  GM+ GI F
Sbjct:  644 LDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCGVPLPPCS----SGSRPTRSHAHPKKQSIATGMSAGIVF 783          
BLAST of FC921448 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16
Identity = 62/204 (30.39%), Postives = 101/204 (49.51%), Query Frame = 2
Query:    8 GEIPKNLTGLPSLISRNISLEEPSPDFPFFMR--RNVSARGLQYNQIWS-FPPTID---------LSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSGGQFQTFPNSSFDGN-NLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGI 580
            GE+P++++ +  +    ++    S   P  +R   N+    L  N+  S  PPT++         LS N LD +I      L +L + DL +N L G I S+   + +LE LDLS+NNLSG IP             V++N+L G IP    F+  P  +F+GN +LCG    + T   +   + S+KKS +++  I+ + + I
Sbjct:  516 GELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGS--VNTTQGLKPCSITSSKKSHKDRNLIIYILVPI 717          

HSP 2 Score: 72.4034 bits (176), Expect = 2.329e-12
Identity = 56/180 (31.11%), Postives = 82/180 (45.56%), Query Frame = 2
Query:   56 NISLEEPSPDFPFFMRRNVSARGLQYNQIWSFPPTIDLSLNRLDGSIWPEFGNLKKLHVFDLKHNNLSGPIPSELSGMTSLETLDLSNNNLSGAIPIXXXXXXXXXXXXVANNHLTGRIPSG-GQFQTFPNSSFDGNNLCGEHRYSCTIDRESGQVKSAKKSRRNKYTIVGMAIGITFGS 592
            N  +E    DFPF    N++               +DLS+NR  G+I P +G   KL  FDL  N L G IP EL  +++L+TL L  N L+G+IP             + +N LTG IPS  G      N     N+L G      +I  E G + + ++   ++  + G  I  +FG+
Sbjct:  102 NTGIEGTFEDFPFSSLPNLTF--------------VDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKLVNLYLFINSLSG------SIPSEIGNLPNLRELCLDRNNLTG-KIPSSFGN 260          
The following BLAST results are available for this feature:
BLAST of FC921448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PSKR1_ARATH1.137e-6762.96Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA2.808e-5856.48Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
PSKR2_ARATH5.697e-3542.72Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PSYR1_ARATH9.095e-3341.33Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRI1_SOLLC4.382e-1938.36Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE7.475e-1937.67Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_ARATH4.102e-1735.42Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRL1_ARATH1.559e-1642.86Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH4.535e-1637.50Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y4885_ARATH5.923e-1630.39Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC32105B01EF RVDevelopN Citrus clementina cDNA clone C32105B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921448 ID=FC921448; Name=FC921448; organism=Citrus clementina; type=EST; length=657bp
TCGCCGGGGAGAGATTCCAAAAAATCTAACTGGATTACCAAGCCTCATCA
GTAGGAATATCTCTTTGGAGGAGCCTTCCCCAGATTTCCCCTTTTTCATG
AGAAGGAATGTTAGTGCAAGAGGGCTGCAGTATAATCAAATTTGGAGCTT
TCCTCCAACTATTGACCTTAGCCTTAACCGTCTTGATGGGTCAATTTGGC
CGGAGTTTGGGAATCTGAAGAAGCTCCATGTGTTTGATTTGAAGCATAAT
AATTTATCTGGACCAATTCCTAGTGAATTGTCTGGGATGACAAGCTTGGA
GACGCTGGATTTGTCCAATAACAATCTATCAGGTGCTATACCTATTTCAT
TGGAAAAGCTCAGCTTTCTTTCTAAGTTTAGTGTTGCCAATAATCATCTC
ACTGGGAGGATCCCGTCGGGAGGCCAGTTTCAGACTTTTCCAAATTCAAG
CTTTGACGGAAATAATCTTTGTGGTGAGCATCGGTACTCTTGTACAATTG
ATAGGGAAAGTGGCCAGGTCAAGTCAGCAAAAAAATCTAGGAGAAACAAA
TACACCATTGTGGGAATGGCTATTGGGATCACATTTGGGTCAGCTTTTCT
TCTTATCCTGATCTTCATGATTTTGCTACGGGCACATAGCCGGGGAGAGG
TTNGATC
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