FC921464

Overview
NameFC921464
Unique NameFC921464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15126 contig Ccv1_Contig15126:26..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.520e-94
Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 1 
Query:  169 MTPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            M PEPED IKDEKNPRPLDEDDIALLKTYGLGPYST IKKAEKE+KD+AKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE
Sbjct:    1 MAPEPED-IKDEKNPRPLDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 174
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.132e-92
Identity = 164/175 (93.71%), Postives = 171/175 (97.71%), Query Frame = 1 
Query:  169 MTPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            M PEPED+I +EKNPRPLDEDDIALLKTYGLGPYSTSIKK EKEIK+MAKK+NDLCGIKESDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKII+PN++DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE
Sbjct:    1 MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 175
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.635e-91
Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 1 
Query:  169 MTPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            M  E ED++KDEKNPRPLDEDDIALLKTYGLGPYS SIKK EKEIKDM+KKVNDL GIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPN+EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE
Sbjct:    1 MAIEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 175
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.060e-90
Identity = 162/175 (92.57%), Postives = 168/175 (96.00%), Query Frame = 1 
Query:  169 MTPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            M  + EDEI+DEKNPRPLDEDDIALLKTYGLGPYS  IKK EKEIKD+AKK+NDLCGIKESDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKII+PN+EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE
Sbjct:    1 MVRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 175
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 256.914 bits (655), Expect = 7.391e-68
Identity = 125/170 (73.53%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            ++E KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE
Sbjct:   13 KEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.653e-68
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            EDE KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE
Sbjct:   14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.653e-68
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            EDE KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE
Sbjct:   14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.653e-68
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            EDE KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE
Sbjct:   14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.653e-68
Identity = 125/170 (73.53%), Postives = 141/170 (82.94%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            EDE+ +E  P  LDE DIALLK+YG+GPYS SI+  E++IK M  KVN+LCGIKESDTG+  PSQWDLV DK    EE PLQVARCTKII+    +AKY+I VKQIAKFVV LGDK+SPTD+EEG+RVGVDRNKYQIQIPLPPKID SVTMM VEEKPD+TY DVGGCKE
Sbjct:    8 EDELLNETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKE 177
[Close]
BLAST of FC921464 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.653e-68
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:  184 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKE 693
            EDE KD+K  R LDE DIALLKTYG   YS  IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKE
Sbjct:   14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKE 182
The following BLAST results are available for this feature:
BLAST of FC921464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PRS7_PRUPE3.520e-9497.1426S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7_ORYSJ1.132e-9293.7126S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7_SPIOL1.635e-9194.2926S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7A_ARATH1.060e-9092.5726S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS7_MOUSE7.391e-6873.5326S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_RAT9.653e-6874.7126S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MACFA9.653e-6874.7126S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN9.653e-6874.7126S protease regulatory subunit 7 OS=Homo sapiens ... [more]
PRS7_DICDI9.653e-6873.5326S protease regulatory subunit 7 OS=Dictyostelium... [more]
PRS7_BOVIN9.653e-6874.7126S protease regulatory subunit 7 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32105C05EF RVDevelopN Citrus clementina cDNA clone C32105C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921464 ID=FC921464; Name=FC921464; organism=Citrus clementina; type=EST; length=693bp
GGACACACAGATCGGATCCTACCACCTCAAGGAAACTCGTGCGGCCGTGC
CTCTCTTTCAAGCCAAACACCTCGACGACACCGTTTCCTCAGAAAGACCT
CGCCGACGGTTTTCAACGCCCAATCTTCCTCTCTAGAACTTGCAAGCAAT
CAGGAAATTCATAAAACAATGACACCCGAGCCGGAAGATGAGATCAAGGA
CGAGAAGAATCCCAGACCCCTTGATGAAGATGACATTGCGCTGCTTAAAA
CATATGGTTTAGGACCGTATTCTACTAGCATAAAGAAAGCAGAGAAGGAG
ATTAAGGACATGGCCAAGAAAGTCAACGACTTGTGTGGTATCAAGGAATC
TGACACAGGCTTAGCTGCACCCAGCCAGTGGGATCTTGTATCCGATAAGC
AGATGATGCAAGAGGAGCAGCCTCTTCAGGTTGCGAGATGCACCAAGATT
ATCAATCCAAATTCTGAAGATGCTAAATATGTAATAAATGTTAAGCAAAT
TGCCAAGTTCGTTGTTGGGCTTGGTGACAAAGTTTCCCCTACTGATATTG
AAGAAGGGATGCGTGTGGGGGTTGACCGGAATAAATATCAAATTCAAATT
CCCTTGCCTCCAAAAATTGATCCAAGTGTAACCATGATGACTGTGGAAGA
GAAACCAGATGTGACATATAATGATGTTGGTGGATGTAAGGAG
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