FC921474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.809e-32 Identity = 82/224 (36.61%), Postives = 130/224 (58.04%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDF--KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVL---RKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQ 659 +GGDV A+ + GK D +++F Y+ GT KP+VA++DGITMG G G+S+ G +RV T+KTVF+ PET +G PD G ++L L G +G LALTG +L G +++ G+ATH+ +G+LP +E+ + L + I L Y +D+E +E I+ FS +++EEI+ L+ + + + K +E + + SP SLK+TL+ Sbjct: 95 AGGDVRAI---ADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGSP----FATKQLEAINKMSPTSLKLTLR 311
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.068e-31 Identity = 73/220 (33.18%), Postives = 125/220 (56.82%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKI-ETIDKCFSHDTIEEIIDALENEAA--SSYDVWCRKAVEKLKEASPLSLKVT 653 SGGD+ A + +GK + ++ F Y+ + T+ KP VA+++GITMG G+G+++ +R+ + T+F+ PET +G+ D ASF+ S LPGY G YL LT + + G + + G+ATH+ P +E+R+ +L T D S I ++ ++ + S + + + I+KCF + +II AL+ A+ S+ + + V+ L SP S+ VT Sbjct: 115 SGGDIKAAALSIQDGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLPGYFGTYLGLTSQIVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFAEFASSSPPTFTPDVMDVINKCFCKNDTVDIIRALKEYASNTSALAEFAKSTVKTLYSKSPTSIAVT 334
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.298e-31 Identity = 79/226 (34.96%), Postives = 129/226 (57.08%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRES---VLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSYEK 671 +GGD+ A+ + G + FF Y GT+ KP+VA+++GITMG G G+S+ G +RV T+KT+F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ + ++ +E+ + L + S + L Y + LD E + + E ID+ FS ++EEI++ L+ + ++ + K E L + SP SLK+T + E+ Sbjct: 92 AGGDIRAIAEAGKAGNLLS-QVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHFVQSEKIESLEKDLVDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGSA----FALKQAETLAKMSPTSLKLTFRQIEE 312
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 78/222 (35.14%), Postives = 127/222 (57.21%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDK---CFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQ 659 +GGD+ + + + K + FF Y G+ KP+VA++ GITMG G G+S+ G +RV T+K +F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ + +L ++EE + L + I + L Y +DR+ E +DK CFS +T+EEII+ L+ + +S + + ++ + + SP SLK+TL+ Sbjct: 96 AGGDIRVISEA-EKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSS----FALEQLKVINKMSPTSLKITLR 312
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 79/231 (34.20%), Postives = 131/231 (56.71%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFED--FKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGD--LVSLDRESVLRK-IETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSYEKVDS 680 +GGD+ A+ + GK D ++FF Y GT+ KP+VA++DGITMG G G+S+ G +RV ++ T+F+ PET +G PD G ++L LPG LG YLALTG +L G ++ G+ATH+ + ++P +E+ + + + L Y + + D+ VL + ++ I+ FS ++E II+ L + +S + K ++ L SP SLK+T + ++ S Sbjct: 95 AGGDIRAV---TDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKIPSLEQDLVAMKCPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDKINSLFSASSVEAIIENLRCDGSS----FALKQLQTLSTMSPTSLKITFRQLKEGSS 318
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.959e-29 Identity = 79/228 (34.65%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFED--FKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQY--GDLVSLDRESVL-RKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSYEK 671 +GGD+ A+ + GK D ++FF Y GT KP+VA++DGITMG G G+S+ G +RV ++KT+F+ PET +G PD G ++L L G LG YLALTG +L G ++ G+ATH+ + +L +E+ + + + + L Y + D+ VL ++ I+ FS +T+EEI++ L+ + +S + K ++ L SP SLK+T + ++ Sbjct: 95 AGGDIRAV---TDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQDLVAMKSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSGNTVEEIMENLKCDGSS----FAMKQLQTLSTMSPTSLKITFRQLKE 315
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.959e-29 Identity = 77/226 (34.07%), Postives = 132/226 (58.41%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV----KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVL---RKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQ 659 +GGD+ AL +E K + +N + L++ Y+ + KP+VA++DGITMG G G+S+ G +RV T++++F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ + +L ++EE + L + + L Y +D++ + ++ I+ CFS +T+E+II+ L + S + + K + K+ SP SLK+TL+ Sbjct: 95 AGGDIKAL----SEAK-KARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQD-GSPFAIEQMKVINKM---SPTSLKITLR 311
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29 Identity = 76/226 (33.63%), Postives = 127/226 (56.19%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFV----KPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKC---FSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQ 659 +GGD+ AL + N + + L++ Y+ + KP++A++ GITMG G G+S+ G +RV T+K+VF+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ +L ++EE + L + I L Y D++ E +DK FS +T+E+I+D L+ + +S + + ++ +K+ SP SLK+TL+ Sbjct: 96 AGGDIRALSEARNTNQ-----KMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDLLALKSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSANTVEQIVDNLQQDGSS----FALEQLKVIKKMSPTSLKITLR 312
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.161e-28 Identity = 70/222 (31.53%), Postives = 126/222 (56.76%), Query Frame = 3 Query: 3 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVL---RKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQ 659 +GGD+ AL + G+ ++ F Y + KP+VA++DGITMG G G+S+ G +RV T++++F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+ATH+ + +L ++EE + L + + L Y + ++ + ++ I+ CFS +T+E+I++ L + + + + ++ + + SP SLK+TL+ Sbjct: 95 AGGDIKALSEAKKAGQTLS-QDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGSP----FAMEQIKVINKMSPTSLKITLR 311
BLAST of FC921474 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.721e-27 Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 3 SGGDVIALYQL--LNE---GKFEDFKN-FFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGRLPLVEERVGKLITDDPSIIETSLAQYGDLVSLDRESVLRKIETIDKCFSHDTIEEIIDALENEAASSYDVWCRKAVEKLKEASPLSLKVTLQSYEK 671 +GGD+ A+Y LNE K D + FF Y L GT V+I +G MG G G+S+ G +RV T+ TVF+ PET +GF D G S++L LP G YLALTG KL G + G+ATH+ N + +E+ + + I + L +Y D + I++ F ++++EI + LE S W ++ ++ LK SP SL V + ++ Sbjct: 84 AGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHFVSNEHIQALEKEIEECENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERIFGKNSVKEIFEQLELLENSE---WAKQTLKTLKSVSPSSLMVVFEQMKQ 309 The following BLAST results are available for this feature:
BLAST of FC921474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921474 ID=FC921474; Name=FC921474; organism=Citrus clementina; type=EST; length=681bpback to top |