FC921496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOS11_ARATH (Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 9.579e-69 Identity = 134/159 (84.28%), Postives = 144/159 (90.57%), Query Frame = 3 Query: 207 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQA 683 MDVPSSWDALRKQARK+EAQLDEQMHSYR+LVS+K +K D E+DLE+GID LL+QLQQVN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDRTRLDLEDG GS EQAL+KEH INR+T QMD VISQAQA Sbjct: 1 MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQAQA 158
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOS12_ARATH (Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 201 SAMDVPSS-WDALRKQARKLEAQLDEQMHSYRKLVS--------SKGSTKVDAAEN--DLESGIDWLLKQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQA 683 S++D+ S W+ LR++ARK+E LD ++ SY KL + GS V + + +E I LL++L +N M +S + V+ L RH++IL + TQEF R++ ++ + +EHA LL R D G SP +L+E A+I+ S +D VI QAQA Sbjct: 4 SSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLSSVR--DDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQA 174
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOSR1_HUMAN (Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12 Identity = 57/186 (30.65%), Postives = 88/186 (47.31%), Query Frame = 3 Query: 204 AMDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQA 683 A S W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A A Sbjct: 2 AAGTSSYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 186
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOSR1_BOVIN (Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQA 683 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A A Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 186
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOSR1_CRIGR (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQA 683 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A A Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 186
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOSR1_RAT (Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 55/179 (30.73%), Postives = 85/179 (47.49%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAENDLESG---------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQA 683 W+ LRKQAR+LE +LD ++ S+ KL +S + D S I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A A Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 186
BLAST of FC921496 vs. ExPASy Swiss-Prot
Match: GOSR1_PONAB (Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 53/177 (29.94%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAEND-------------------LESGIDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQA 683 W+ LRKQAR+LE +LD ++ S+ KL +S + D + I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ + +E +L+ R+ D GV + L LKEH + S ++ IS A A Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMSIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMA 184 The following BLAST results are available for this feature:
BLAST of FC921496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921496 ID=FC921496; Name=FC921496; organism=Citrus clementina; type=EST; length=734bpback to top |