FC921510

Overview
NameFC921510
Unique NameFC921510
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC921510_ssr12 microsatellite FC921510_ssr12:12..25. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10254 contig Ccv1_Contig10254:2..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.759e-85
Identity = 150/180 (83.33%), Postives = 161/180 (89.44%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VEK++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EF PSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQIVL+I
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.369e-84
Identity = 151/180 (83.89%), Postives = 160/180 (88.89%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEF PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ+H              WKGETLQEYWWCTE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K G LPDP+STDNAEFQIVLTI
Sbjct:    1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQEHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKNGALPDPSSTDNAEFQIVLTI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.984e-84
Identity = 150/180 (83.33%), Postives = 157/180 (87.22%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EF PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLTI
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.984e-84
Identity = 150/180 (83.33%), Postives = 157/180 (87.22%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EF PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLTI
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.984e-84
Identity = 148/180 (82.22%), Postives = 159/180 (88.33%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VE + SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EF PSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWC+E+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEE++EKTG+LPDP+STDNAE QIVLTI
Sbjct:    1 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCSERALDWGPGGGPDLIVDDGGDVTLLIHEGVKAEEVFEKTGQLPDPSSTDNAEMQIVLTI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.203e-84
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EF PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+I
Sbjct:    1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 6.796e-84
Identity = 150/178 (84.27%), Postives = 157/178 (88.20%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 661
            MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEF PSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ L+WG GGGPDLIVDDGGDATLLIHEGVKAEE YEK GK+PDPASTDNAEFQIVL
Sbjct:    1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERCLEWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGKIPDPASTDNAEFQIVL 178          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.977e-83
Identity = 148/178 (83.15%), Postives = 156/178 (87.64%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 661
            MAL+VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EF PSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWG GGGPDLIVDDGGDATLLIHEGVKAEE YEK G +PDP STDN EFQ+VL
Sbjct:    1 MALAVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGTIPDPTSTDNPEFQLVL 178          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.373e-83
Identity = 147/180 (81.67%), Postives = 159/180 (88.33%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MALSVEK+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EF PSQPFKGA+ITGSLHMTIQT VLIETLTALGAEVRWCSCNIFSTQDH              WKGETLQEYWWCTE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K+G +PDPASTDNAEFQIVL+I
Sbjct:    1 MALSVEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTGVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSCAVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKSGAIPDPASTDNAEFQIVLSI 180          
BLAST of FC921510 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 8.307e-82
Identity = 145/180 (80.56%), Postives = 158/180 (87.78%), Query Frame = 2
Query:  128 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFDPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 667
            MALSVEK++SGRE+KVKDL QADFGRLE+ELAEVEMPGLMACR EF PSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFS+QDH              WKGETL+EYWWCTE+ LDWG GGGPDLIVDDGGDATLLIHEGVKAEE +EK+GK+PDP STDN EF+IVLTI
Sbjct:    1 MALSVEKTSSGREYKVKDLFQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSQDHAAAAIARDSAAVFAWKGETLEEYWWCTERCLDWGVGGGPDLIVDDGGDATLLIHEGVKAEEEFEKSGKVPDPESTDNPEFKIVLTI 180          
The following BLAST results are available for this feature:
BLAST of FC921510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH1_ARATH2.759e-8583.33Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_CATRO1.369e-8483.89Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_TOBAC3.984e-8483.33Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY3.984e-8483.33Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_MEDSA3.984e-8482.22Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_LUPLU5.203e-8483.33Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_PHASS6.796e-8484.27Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_MESCR1.977e-8383.15Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_PETCR3.373e-8381.67Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_WHEAT8.307e-8280.56Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]

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Properties
Property NameValue
Genbank descriptionC32105G08EF RVDevelopN Citrus clementina cDNA clone C32105G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921510 ID=FC921510; Name=FC921510; organism=Citrus clementina; type=EST; length=669bp
GGCTCAACCCACTCTCTCTCTCTCTCGCTTGTACAATCATTCACTTTGTT
TGGTTAGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTCTTT
TAGATCTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAAATC
CGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCG
GCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCT
TGCCGCGCCGAGTTCGACCCTTCACAGCCTTTCAAAGGAGCCAAGATCAC
CGGTTCACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACACTCA
CCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACC
CAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGC
CTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCC
TGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGT
GACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGA
GAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTC
AGATTGTTTTGACTATCAT
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