FC921520

Overview
NameFC921520
Unique NameFC921520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921520 vs. ExPASy Swiss-Prot
Match: IP5PC_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 12 OS=Arabidopsis thaliana GN=5PTASE12 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27
Identity = 55/83 (66.27%), Postives = 63/83 (75.90%), Query Frame = 3
Query:  447 VTPATGMIKPDRTAEMSVHHEDFQTLEEFVDGIPXNWWCEDTRDQEVVLVLKVRGRYSTETRNHRIRVRHCFSAKTKERIINP 695
            V PA G IKPD + E+SVHHE+F TLEEFVDGIP NWWCEDTRD+E +LV+ V+G  STET  HR+ VRHCFSAK      NP
Sbjct: 1023 VMPAAGTIKPDSSVEVSVHHEEFHTLEEFVDGIPQNWWCEDTRDKEAILVVNVQGGCSTETVCHRVHVRHCFSAKNLRIDSNP 1105          
BLAST of FC921520 vs. ExPASy Swiss-Prot
Match: IP5P4_ARATH (Type II inositol-1,4,5-trisphosphate 5-phosphatase FRA3 OS=Arabidopsis thaliana GN=FRA3 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 3
Query:  447 VTPATGMIKPDRTAEMSVHHEDFQTLEEFVDGIPXNWWCEDTRDQEVVLVLKVRGRYSTETRNHRIRVRHC 659
            V+P TG IKP++ AE+SVH EDF T+EEFVDG+  N WCEDTRD+EV+LVL V GR+STETR HRIRVRHC
Sbjct:  984 VSPGTGTIKPNQIAEVSVHLEDFPTVEEFVDGVAQNSWCEDTRDKEVILVLVVHGRFSTETRKHRIRVRHC 1054          
BLAST of FC921520 vs. ExPASy Swiss-Prot
Match: IP5PD_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 13 OS=Arabidopsis thaliana GN=5PTASE13 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23
Identity = 43/75 (57.33%), Postives = 61/75 (81.33%), Query Frame = 3
Query:  447 VTPATGMIKPDRTAEMSVHHEDFQTLEEFVDGIPXNWWCEDTRDQEVVLVLKVRGRYSTETRNHRIRVRHCFSAK 671
            V+PA G+I P+ + ++ VHHEDF ++EE+VDGIP NWWCEDTRD+E +L++ +RG  ST  R+H ++VRHCFSA+
Sbjct: 1017 VSPAAGIINPEGSVDVKVHHEDFYSMEEYVDGIPQNWWCEDTRDKEAILMVNIRGSCSTTLRSHSVKVRHCFSAR 1091          
BLAST of FC921520 vs. ExPASy Swiss-Prot
Match: IP5PE_ARATH (Type II inositol-1,4,5-trisphosphate 5-phosphatase 14 OS=Arabidopsis thaliana GN=5PTASE14 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  447 VTPATGMIKPDRTAEMSVHHEDFQTLEEFVDGIPXNWWCEDTRDQEVVLVLKVRGRYSTETRNHRIRVRHCFSA 668
            V+P  G+IKPD + ++ VHHED    EEF+DGI  N   E++ D+EV L++ V+G  ST T +H I+VRHC SA
Sbjct: 1026 VSPGAGIIKPDASLQVKVHHEDSHNSEEFIDGIQQNSLSEESSDKEVTLIIIVQGSCSTRTISHSIKVRHCSSA 1099          
The following BLAST results are available for this feature:
BLAST of FC921520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IP5PC_ARATH8.407e-2766.27Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
IP5P4_ARATH2.290e-2471.83Type II inositol-1,4,5-trisphosphate 5-phosphatase... [more]
IP5PD_ARATH1.484e-2357.33Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
IP5PE_ARATH9.642e-1550.00Type II inositol-1,4,5-trisphosphate 5-phosphatase... [more]
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Properties
Property NameValue
Genbank descriptionC32105H08EF RVDevelopN Citrus clementina cDNA clone C32105H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921520 ID=FC921520; Name=FC921520; organism=Citrus clementina; type=EST; length=702bp
GAAAGTGAGCCTGCTGTTTCAACTCTCAAGGCTTGTTAGGCATTATATTG
GAACCTTGATACACAAGCAGATATGTTGATTCATGTGTTCAAAATCATTT
GTACATGTCTGATTTGAGATAGTTGTAGGATGTTTCTTTAATGGAAAAAT
GGCCCTTGTGTCTGCCTTTGTCTCGCACTCTGACTGACAGTAAGAAGTCG
ACTTTCATTTTTTAAATAATGATGATAAGAATTATGAGAATGATATTACT
TGCTGTCAAGTTTTGCACAATTGTCATTTTTCAAACTGTGAATCATAGGT
GGTTATAACTCATACATAGCTGGAGCATTTTTTTTTTCCCGCTTTTTAGC
AAGAGTTGAGTGATTTTTTGTTTCTATCCTTTCAGATGTACTGAATCTAG
TTTTGTGATTAGTTTTAGTTTCATCTATTTGTATTATTTGAACTAGGTCA
CACCCGCTACTGGCATGATCAAACCAGATCGCACAGCAGAAATGTCAGTT
CATCACGAGGACTTTCAGACCCTTGAAGAGTTTGTTGATGGTATCCCGCA
NAACTGGTGGTGTGAAGACACAAGAGACCAGGAAGTTGTGCTGGTGCTTA
AGGTTCGTGGCAGGTATTCAACTGAGACAAGAAATCATCGCATCCGTGTG
CGACACTGTTTTTCAGCCAAAACAAAAGAGAGGATCATAAACCCATGAAT
CT
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