FC921521

Overview
NameFC921521
Unique NameFC921521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2578 contig Ccv1_Contig2578:20..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XYLB_PONAB (Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.368e-51
Identity = 106/215 (49.30%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   85 LGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            LG+D STQ +K   +D+ LN    E + FD +LP + T+ GV+    +   + SP  MW++A                 V A+SG+GQQHGS+YWK GS   L+SL P  PL  QL D FS  + PVWMDSS+T QCR++E A+GGA  LS LTGSR YERFTG QI K++Q  P  Y  TERIS+VSSF ASL +G+Y+ ID +D +GMNL+ I
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGSQQALTSLSPDLPLHQQLQDCFSISDCPVWMDSSSTTQCRQLEAAMGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQI 224          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XYLB_MOUSE (Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.787e-51
Identity = 107/215 (49.77%), Postives = 136/215 (63.26%), Query Frame = 1
Query:   85 LGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            LG+D STQ +K   +D+ LN    + + FD +LP + T+ GV+    +   + SP  MW++A                 V A+SG+GQQHGSVYWK G++  LSSL P  PL  QL   FS  + P+WMDSSTTAQC ++E AVGGA  LS LTGSR YERFTG QI KLFQ  P  Y  +ERIS+VSSF ASL +G Y+ ID +D +GMNL+ I
Sbjct:   26 LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWVQALDLILGKMKSSGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALPLHQQLQSCFSISDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQIAKLFQKNPEAYSHSERISLVSSFAASLFLGGYSPIDYSDGSGMNLLQI 239          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XYLB_HUMAN (Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.787e-51
Identity = 107/215 (49.77%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   85 LGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            LG+D STQ +K   +D+ LN    E + FD +LP + T+ GV+    +   + SP  MW++A                 V A+SG+GQQHGS+YWK G+   L+SL P   L  QL D FS  + PVWMDSSTTAQCR++E AVGGA  LS LTGSR YERFTG QI K++Q  P  Y  TERIS+VSSF ASL +G+Y+ ID +D +GMNL+ I
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQI 224          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XYLB_RAT (Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.401e-50
Identity = 105/215 (48.84%), Postives = 136/215 (63.26%), Query Frame = 1
Query:   85 LGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            LG+D STQ +K   +D+ LN    + + FD +LP + T+ GV+    +   + SP  MW++A                 V A+SG+GQQHGSVYWK G++  LSSL P   L  QL   FS  + P+WMDSSTTAQC ++E AVGGA  LS LTGSR YERFTG QI K+FQ  P  Y ++ERIS+VSSF ASL +G Y+ ID +D +GMNL+ I
Sbjct:   11 LGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVH-KDRLTVTSPVLMWVQALDLILEKMKASGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALLLHQQLQACFSVSDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQISKIFQKNPEAYSNSERISLVSSFAASLFLGRYSPIDYSDGSGMNLLQI 224          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XYLB_BOVIN (Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 103/215 (47.91%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   85 LGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            LG+D STQ +K   +D+ L+    + + FD +L  + T+ GV+    +   + SP  MW++A                 V A+SG+GQQHGSVYWK G++ +L+SL P  PL +QL   FS    PVWMDSST AQCR++E AVGGA  LS LTGSR YERFTG QI K++Q  P  Y  TERIS+VSSF ASL +G+Y+ +D +D +GMNL+ I
Sbjct:   11 LGWDFSTQQVKVVAVDAELSVFYEDSVHFDRDLVEFGTQGGVHVH-KDGLTVTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSVYWKTGASQVLTSLSPDLPLREQLQACFSISNCPVWMDSSTAAQCRQLEAAVGGAQALSLLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPVDYSDGSGMNLLQI 224          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: YNE7_CAEEL (Uncharacterized sugar kinase R08D7.7 OS=Caenorhabditis elegans GN=R08D7.7 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.325e-46
Identity = 97/217 (44.70%), Postives = 135/217 (62.21%), Query Frame = 1
Query:   82 FLGFDSSTQSLKATVLDSNLNTVASEQLQFDS--ELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXXVAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            FLG D STQ +KA ++D N   V +  + F +  +L  + T++GV++   N   I SP  MWIEA                +  +SG  QQHG+VYWK G+   L  LD  + L +QL   FS ++SP+WMDSST  QC+E+E  VGG  E++KLTGSR + RF+  QI+K+   +  V+ DTE++S++SSF ASLLIG YA I+ TD +GMNLM+I
Sbjct:    5 FLGIDLSTQQIKAVIIDQNGKVVHTTAINFSTHEKLKKFGTENGVHK---NGSVITSPVIMWIEAIDILFNDLRENGWTDKLRGISGCAQQHGTVYWKNGAENSLKGLDESRSLAEQLEMCFSVQKSPIWMDSSTEKQCQELETFVGGDQEMAKLTGSRAHHRFSAAQIKKIVDEKQDVWKDTEKVSLISSFFASLLIGKYALIELTDGSGMNLMNI 218          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XKS1_YEAST (Xylulose kinase OS=Saccharomyces cerevisiae GN=XKS1 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44
Identity = 97/242 (40.08%), Postives = 145/242 (59.92%), Query Frame = 1
Query:   13 LLAKIEHKSIKQMEDYSLPKDSLFLGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXX-VAAVSGSGQQHGSVYWKKGSAAILSSLD--PKKPLVDQLGDT-FSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            +L  +  +  +++ + ++  DS +LGFD STQ LK   ++ +L  V SE ++F+ +LPHY TK GVY    +   I  P  MW+EA                 V AVSGS QQHGSVYW   + ++L  L+  P+K L+  +    F+ + +P W D ST  QC+E E+ +GG  ++++LTGSR + RFTGPQI K+ Q +P  Y+ T+ IS+VS+F+ S+L+G    ++E DA GMNL DI
Sbjct:    1 MLCSVIQRQTREVSN-TMSLDSYYLGFDLSTQQLKCLAINQDLKIVHSETVEFEKDLPHYHTKKGVY---IHGDTIECPVAMWLEALDLVLSKYREAKFPLNKVMAVSGSCQQHGSVYWSSQAESLLEQLNKKPEKDLLHYVSSVAFARQTAPNWQDHSTAKQCQEFEECIGGPEKMAQLTGSRAHFRFTGPQILKIAQLEPEAYEKTKTISLVSNFLTSILVGHLVELEEADACGMNLYDI 238          
BLAST of FC921521 vs. ExPASy Swiss-Prot
Match: XKS1_SCHPO (Xylulose kinase OS=Schizosaccharomyces pombe GN=xks1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43
Identity = 93/216 (43.06%), Postives = 129/216 (59.72%), Query Frame = 1
Query:   79 LFLGFDSSTQSLKATVLDSNLNTVASEQLQFDSELPHYKTKDGVYRDPSNNGRIVSPTRMWIEAXXXXXXXXXXXXXXXXVAAVSGSGQQHGSVYWKKGSAAILSSLDPKKPLVDQLGDTFSTKESPVWMDSSTTAQCREIEKAVGGALELSKLTGSRGYERFTGPQIRKLFQTQPGVYDDTERISVVSSFMASLLIGAYACIDETDAAGMNLMDI 726
            +FLG D STQ LK  V+D +LN      + FD +L  Y T  GVYR   N   + +P  MW++A                + A+SG+GQQH SV+  KGS   L+SLD K  L  QL ++     SP W D+STT +C E+E  +GGA  L+ LTGS+ + RFTGPQI++  +  P  Y++TERI++VS+F+AS+L+   A +D +D  GMNL DI
Sbjct:    1 MFLGLDLSTQQLKGVVIDESLNVHQEVAVDFDRDLSDYNTIKGVYR---NGYEVFAPVCMWLDAIDLLFERLKASVDVSKIQAISGAGQQHASVFLLKGSKKALNSLDAKSSLKQQL-ESLIHPTSPNWQDASTTKECEELESCIGGAKALADLTGSKAHLRFTGPQIKRFRRLHPETYENTERIALVSNFLASVLLQTEAPLDISDVCGMNLWDI 212          
The following BLAST results are available for this feature:
BLAST of FC921521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
XYLB_PONAB1.368e-5149.30Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1[more]
XYLB_MOUSE1.787e-5149.77Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1[more]
XYLB_HUMAN1.787e-5149.77Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3[more]
XYLB_RAT4.401e-5048.84Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 ... [more]
XYLB_BOVIN7.508e-5047.91Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1[more]
YNE7_CAEEL1.325e-4644.70Uncharacterized sugar kinase R08D7.7 OS=Caenorhabd... [more]
XKS1_YEAST4.713e-4440.08Xylulose kinase OS=Saccharomyces cerevisiae GN=XKS... [more]
XKS1_SCHPO6.806e-4343.06Xylulose kinase OS=Schizosaccharomyces pombe GN=xk... [more]
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Properties
Property NameValue
Genbank descriptionC32105H09EF RVDevelopN Citrus clementina cDNA clone C32105H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921521 ID=FC921521; Name=FC921521; organism=Citrus clementina; type=EST; length=726bp
GACTGAGCTCTGCTCCTCGCCAAAATTGAACACAAAAGCATAAAACAAAT
GGAGGATTATTCCCTTCCAAAGGACTCCCTTTTTCTCGGATTTGACAGCT
CTACTCAGTCATTGAAGGCAACTGTTTTGGACTCAAATCTCAACACCGTC
GCTTCCGAGCAACTACAGTTTGACTCTGAATTGCCCCATTACAAGACCAA
AGATGGGGTATACCGAGACCCTTCGAATAATGGCAGAATTGTTTCTCCCA
CCCGCATGTGGATTGAGGCTTTGGATTTGATGCTTCAAAAACTCTCCAAA
TCTTTGGATTTGTCCAAAGTTGCAGCTGTTTCTGGTAGCGGACAGCAACA
TGGTAGTGTGTATTGGAAGAAAGGCAGTGCTGCTATTTTGTCATCTTTAG
ATCCAAAGAAGCCGTTGGTTGATCAATTGGGCGATACCTTTTCAACTAAG
GAATCTCCGGTGTGGATGGATAGCAGCACCACAGCTCAATGTAGGGAGAT
AGAGAAGGCTGTTGGTGGTGCATTGGAGTTGTCTAAACTTACAGGATCAC
GTGGTTATGAAAGATTCACCGGACCCCAGATTAGGAAGTTATTTCAAACA
CAGCCAGGAGTTTATGACGATACTGAGAGGATTTCCGTTGTTAGCTCTTT
CATGGCGTCTCTTCTGATTGGGGCATATGCCTGTATTGATGAAACTGATG
CAGCAGGNATGAACTTGATGGATATC
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