FC921658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_MOUSE (Leucyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Lars PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.446e-65 Identity = 127/235 (54.04%), Postives = 168/235 (71.49%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFC-GGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHY-KTTCSESSKTGFMIF 688 SDSTI+MA+YTVAH+L GD+ G I P QMT +VW+++F P+P++ IP L+++KQEFE+WYP DLR SGKDLI NHL++ IYNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QA+++FSAD R +LADAGD V+DANFV +A+ GILRL + W++E+LA SSLR+GP ++ DRVF +E+N + TDQ+Y K E+ KTGF F Sbjct: 597 SDSTIYMAFYTVAHLLQGGDLNGQAESPLGIRPQQMTKDVWDYVFFKDAPFPKTQ-IPKEKLDQLKQEFEFWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMLASCSSLRSGPADSFNDRVFASEMNAGIIKTDQNYEKMMFKEALKTGFFEF 830
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_SCHPO (Putative leucyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC26F1.13c PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.807e-65 Identity = 117/219 (53.42%), Postives = 161/219 (73.52%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTGS--IEPSQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKTT 652 +DSTI+MAYYT+ H+LH D+YG G+ I+P QMT EVW+ +F P P++++I L R+ +EF+Y+YPFD+R SGKDL+ NHLTFC+Y HTAI +++WP+G R NGH+++N EKMSKSTGNF TL +A ++F ADATR +LADAGD VDDANF +AN+ ILRL + AW +E++ +LRTG P + D+VFENEIN +E + + + T Sbjct: 619 TDSTIYMAYYTICHLLHS-DVYGKVPGALNIKPEQMTPEVWDHVFRQAPKPKNTSISDEALARLCREFQYFYPFDIRASGKDLVPNHLTFCLYTHTAIFDEKYWPKGIRANGHLLMNGEKMSKSTGNFMTLHEATKKFGADATRLALADAGDTVDDANFEEALANSAILRLYTQEAWCKEMMENLDNLRTG-PYNFHDKVFENEINQLIESSREAFSAT 835
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_HUMAN (Leucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 7.584e-65 Identity = 126/235 (53.62%), Postives = 169/235 (71.91%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFCG-GPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHY-KTTCSESSKTGFMIF 688 SDSTI+MA+YTVAH+L G+++G I P QMT EVW+++F P+P++ I L+++KQEFE+WYP DLRVSGKDL+ NHL++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QAI++FSAD R +LADAGD V+DANFV +A+ GILRL + W++E++A SLR+GP ST+ DRVF +E+N + TDQ+Y K E+ KTGF F Sbjct: 595 SDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTKEVWDYVFFKEAPFPKTQ-IAKEKLDQLKQEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPASTFNDRVFASELNAGIIKTDQNYEKMMFKEALKTGFFEF 828
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_PONAB (Leucyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=LARS PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64 Identity = 125/235 (53.19%), Postives = 169/235 (71.91%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFCG-GPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHY-KTTCSESSKTGFMIF 688 SDSTI+MA+YTVAH+L G+++G I P QMT EVW+++F P+P++ I L+++KQEFE+WYP DLRVSGKDL+ NHL++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QAI++FSAD R +LADAGD V+DANFV +A+ GILRL + W++E++A SLR+GP +T+ DRVF +E+N + TDQ+Y K E+ KTGF F Sbjct: 595 SDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTKEVWDYVFFKEAPFPKTQ-IAKEKLDQLKQEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKMMFKEALKTGFFEF 828
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_NEUCR (Leucyl-tRNA synthetase, cytoplasmic OS=Neurospora crassa GN=leu-6 PE=3 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 4.306e-60 Identity = 113/223 (50.67%), Postives = 153/223 (68.61%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFCGGPYPE----SSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKTT 652 SDST++MAYYTVAH LH+ D++G G +I QM DEVW++IFC + S IP L+ M++EF+Y+YP D+RVSGKDLI NHLTF +YNH A+ + +WP+ R NGH+ LN EKMSKSTGNF TL ++++ ADA R +LADAGDG+ D+NFV D+A+ ILR W+EE L + SLRTG +++ D +F+NE+N V +HY+ T Sbjct: 635 SDSTVYMAYYTVAHWLHR-DLFGREKGKGNIGADQMIDEVWDYIFCRTELSDHLVTKSGIPKETLDSMRREFQYFYPLDIRVSGKDLIPNHLTFWLYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTGNFMTLDDVVKKYGADAARVALADAGDGISDSNFVEDVADNTILRFYTNKEWIEETLK-DESLRTGELNSFQDALFDNEMNALVNEARKHYEET 855
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_CAEEL (Leucyl-tRNA synthetase OS=Caenorhabditis elegans GN=lrs-1 PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.385e-58 Identity = 118/234 (50.43%), Postives = 159/234 (67.95%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFCGGPYPESSNIP--SSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIM--SQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAV-ESSLRTGPPSTYADRVFENEINIAVEMTDQHYK-TTCSESSKTGF 679 SDSTI+ AYYTVAH+L +G GS G I+ QMTD W ++F G Y +S +P L +++EF YWYP D+R SGKDLI NHLT+ ++NH AI WP+G R NGH++LN+EKMSKSTGNF TL++AIE+FSAD R SLADAGDG++DANFV+ +A+ ILRL I W++E++ ++ L +ADRVF NE+N + T+Q+Y+ T ++ KTGF Sbjct: 596 SDSTIYNAYYTVAHLLQQGAFDGSVVGPAGIKADQMTDASWSYVFLGEIY-DSKTMPVEEEKLKSLRKEFMYWYPIDMRASGKDLIGNHLTYLLFNHAAIWPTDTSKWPKGIRANGHLLLNNEKMSKSTGNFMTLEEAIEKFSADGMRLSLADAGDGLEDANFVYAMADAAILRLFTMIEWIKEMIEQRDAGLLRKDAKKFADRVFANEMNSLIAATEQNYEATNFKDALKTGF 828
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_DICDI (Leucyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=leuS PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.031e-58 Identity = 110/219 (50.23%), Postives = 146/219 (66.67%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTGS--IEPSQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKTT 652 SDSTI+MA+YTVAH+L +GD+ GS GS I P QMT W+++ G PYPE + L +K+EF YWYP D+RVSG DLIQNHLTF +Y H AI ++ P+ R NG + LN EKMSKSTGNF TL ++ +FSAD TR +LADAGD ++DANFV A T +L+L +I W++E L R+GP D +FE+EIN + +++ Y+ T Sbjct: 593 SDSTIYMAFYTVAHLL-QGDVNGSKPGSAGITPKQMTSACWDYVLMGKPYPEGCEVSEEKLKELKKEFTYWYPVDIRVSGADLIQNHLTFFLYTHAAIFEKKFQPKSIRANGFVNLNGEKMSKSTGNFLTLVDSVAKFSADGTRVALADAGDSIEDANFVDQTAVTSLLKLHTQIQWVQETLDSIDKFRSGPLDRIQDTIFESEINNIIVESEKAYQKT 810
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_YEAST (Leucyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=CDC60 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.456e-57 Identity = 112/219 (51.14%), Postives = 150/219 (68.49%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTG--SIEPSQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKTT 652 SDSTI+ ++YT+AH+L K D YG+ G I QMTDEV+++IF +++NIP L ++++EFEY+YP D+ +SGKDLI NHLTF IY H A+ ++ WP+G R NGH+MLN+ KMSKSTGNF TL+Q +E+F ADA R + ADAGD V+DANF AN ILRL W EE+ ES+LRTG + + D FE+E+N +E T + Y T Sbjct: 611 SDSTIYQSFYTIAHLLFK-DYYGNEIGPLGISADQMTDEVFDYIFQHQDDVKNTNIPLPALQKLRREFEYFYPLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLEQTVEKFGADAARIAFADAGDTVEDANFDESNANAAILRLFNLKEWAEEI-TKESNLRTGEITDFFDIAFEHEMNALIEKTYEQYALT 827
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYL_AERPE (Leucyl-tRNA synthetase OS=Aeropyrum pernix GN=leuS PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.847e-41 Identity = 94/236 (39.83%), Postives = 139/236 (58.90%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTGSIEPSQMTDEVWEFIFCG----GPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFS--LADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVESSLRTGPPS----TYADRVFENEINIAVE-----MTDQHYKTTCSES 664 SDSTI+MAYYT+A + YG +EP +T EV++++F G G S IP +L M++EF YWYP D+R+SGKDLI NHL F I++HTAI + WPR NG +++ EKMSKS GNF L+QA++ + ADATR++ LA A G+DDANF +A++ + L++ + ++ E G P+ + DR FE+ +N + M + ++KT E+ Sbjct: 521 SDSTIYMAYYTIAKYTQHPEKYG-----VEPEMLTPEVFDYVFLGAGDPGEVSRRSGIPQGLLEEMRREFLYWYPLDMRISGKDLIPNHLVFFIFHHTAIFPRELWPRAIGVNGWVLVAGEKMSKSKGNFILLRQALDWWGADATRWAEVLAGADSGLDDANFEPSVADSAVSLLSQWLDFVRE--------NYGRPARREERWVDRWFESRLNSTIARVTRLMEEANFKTALVEA 743
BLAST of FC921658 vs. ExPASy Swiss-Prot
Match: SYLC_ENCCU (Probable leucyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU06_0280 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40 Identity = 92/235 (39.15%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 2 SDSTIHMAYYTVAHMLHKGDMYGSTTGSIEPS-QMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDIANTGILRLTKEIAWMEEVLAVES-------SLRTGPPSTYADRVFENEINIAV-EMTDQHYKTTCSESSKTGF 679 SDSTI+MA YT H L++ D+ G + PS +++D+VW +IF E IL+ ++ F Y+YP DLRV GKDL++NHL F ++NH A+ ++HWP+ NGH+MLNSEKMSKS+GN+ T+ +++++F +TR LA GDG +DANFV AN +L+L + +EE+ S ++ +ADR I++ V T H T + K GF Sbjct: 429 SDSTIYMAMYTFKHFLYR-DLEGKD--ELFPSNRLSDDVWNYIFLNRSITEDLAPYEEILSNCRESFNYFYPIDLRVGGKDLLKNHLIFFLFNHVALFEEKHWPKRMFTNGHLMLNSEKMSKSSGNYMTVDESLDKFGVSSTRMCLAVCGDGNEDANFVESNANAFVLKLYSYVKMIEELCTGRSLNPCILDLMKGYGEMGFADRFLMQTISMNVAHATRAHEDMTYRDVVKYGF 660 The following BLAST results are available for this feature:
BLAST of FC921658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921658 ID=FC921658; Name=FC921658; organism=Citrus clementina; type=EST; length=693bpback to top |