FC921666

Overview
NameFC921666
Unique NameFC921666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 3.122e-116
Identity = 202/217 (93.09%), Postives = 211/217 (97.24%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++ CPAIGK FAAEEISAQVLRKLVDDASKFLND VTKAVV VPAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFE+KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR+VDWLA +FKRDEGIDLLKDKQALQRLTETAEKAKMELSSL+QTNISLPFITATADGPKHI+TTLTR KFEELCSDLLDRL+TPVE
Sbjct:  166 KLDCPAIGKSFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLSQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLRTPVE 382          

HSP 2 Score: 38.5058 bits (88), Expect = 3.122e-116
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 1
Query:    1 DEESKQVSYRVVRDENGN 54
            DEESKQVSYRV+RD+NGN
Sbjct:  147 DEESKQVSYRVIRDDNGN 164          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.625e-115
Identity = 205/214 (95.79%), Postives = 209/214 (97.66%), Query Frame = 3
Query:   66 CPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            CPAIGKQFAAEEISAQVLRKLVDDASKFLND VTKAVV VPAYFNDSQRTATKDAGRIAGL+VLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAS+FKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQ NISLPFITATADGPKHI+TTLTR KFEEL SDLLDRL+TPVE
Sbjct:   49 CPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASSFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQANISLPFITATADGPKHIETTLTRAKFEELWSDLLDRLRTPVE 262          

HSP 2 Score: 35.4242 bits (80), Expect = 2.625e-115
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 1
Query:    1 DEESKQVSYRVVRDENGN 54
            DEESKQVSY VVRDEN N
Sbjct:   27 DEESKQVSYTVVRDENNN 44          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.687e-96
Identity = 172/217 (79.26%), Postives = 198/217 (91.24%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            +V  P  GKQFA EEISA+VLRKLV+DASK+L ++VT+AV+ VPAYFNDSQR ATKDAG+IAG++V+RIINEPTAASLAYGF+KK+NETILVFDLGGGTFDVSVLEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA  F++DEGIDL KDKQALQRLTE AEKAK+ELSS+TQ  I+LPFITAT DGPKH+D TLTR KFEELC+DL+DR + PVE
Sbjct:   99 KVDSPGAGKQFAPEEISAKVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGIEVMRIINEPTAASLAYGFDKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAEQFRKDEGIDLRKDKQALQRLTEAAEKAKIELSSVTQAEINLPFITATQDGPKHLDMTLTRAKFEELCADLIDRCRIPVE 315          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 8.726e-96
Identity = 171/217 (78.80%), Postives = 198/217 (91.24%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++ CPA GKQFA EEISAQVLRKLVDDASK+L ++VT+AV+ VPAYFNDSQR ATKDAG+IAG++VLRIINEPTAASLAYG +KK+NETILVFDLGGGTFDVS+LEVG+GVFEVL+TSGDTHLGGDDFDK+IVD+LA  F++ EGIDL KDKQALQRLTE AEKAK+ELS ++QT I+LPFITAT DGPKH+DTTL+R KFEE+CSDL+DR   PVE
Sbjct:  100 KLDCPAQGKQFAPEEISAQVLRKLVDDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGIEVLRIINEPTAASLAYGLDKKDNETILVFDLGGGTFDVSILEVGEGVFEVLATSGDTHLGGDDFDKKIVDFLAGEFQKAEGIDLRKDKQALQRLTEAAEKAKIELSGVSQTEINLPFITATQDGPKHLDTTLSRAKFEEICSDLIDRCGIPVE 316          

HSP 2 Score: 23.8682 bits (50), Expect = 8.726e-96
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:    7 ESKQVSYRVVRDENGN 54
            E+ +V+Y VV+D NGN
Sbjct:   83 EATEVAYSVVKDGNGN 98          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.141e-95
Identity = 172/217 (79.26%), Postives = 196/217 (90.32%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++ CPA+GKQFA EEISAQVLRKL +DASK+L + VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK NETILVFDLGGGTFDVS+LEVGDGVFEVL+TSGDTHLGGDDFDK+IVD+LA +F+  EGIDL KD+QALQRLTE AEKAK+ELSS+ QT I+LPFITAT DGPKH+D TLTR KFEELCSDL+DR + PVE
Sbjct:   99 KLDCPALGKQFAPEEISAQVLRKLKEDASKYLGEEVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKANETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTHLGGDDFDKKIVDYLAESFRAQEGIDLRKDRQALQRLTEAAEKAKIELSSVMQTEINLPFITATQDGPKHLDMTLTRAKFEELCSDLIDRCRVPVE 315          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_EMIHU (Chaperone protein dnaK OS=Emiliania huxleyi GN=dnaK PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.068e-93
Identity = 164/217 (75.58%), Postives = 197/217 (90.78%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVE 707
            ++ CPA+GKQFA+EEISAQVLRKL DDA+K+L ++VT+AV+ VPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASL+YG +KK+NETILVFDLGGGTFDVS+LEVGDGVFEVL+TSGDT LGGDDFD++IV WL + FK DEGIDL +D QALQRLTE AEKAK+ELS+LTQ++I+LPFI+ T +GPKH++  LTR KFEELCSDL+DR KTP++
Sbjct:   99 KLDCPALGKQFASEEISAQVLRKLADDATKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLSYGLDKKDNETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTRLGGDDFDEKIVQWLVNEFKNDEGIDLTQDNQALQRLTEAAEKAKVELSTLTQSSINLPFISVTPEGPKHLEKDLTRAKFEELCSDLIDRCKTPIQ 315          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.821e-93
Identity = 167/216 (77.31%), Postives = 196/216 (90.74%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPV 704
            ++ CPA+ K FA EEISAQVLRKLV+DAS +L ++VT+AV+ VPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK++EGIDL KD+QALQRLTE AEKAK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS+L+D+   PV
Sbjct:   99 KIACPALNKDFAPEEISAQVLRKLVEDASTYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQNEGIDLGKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRGKFEELCSNLIDKCSIPV 314          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.057e-93
Identity = 166/216 (76.85%), Postives = 195/216 (90.28%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPV 704
            ++ CPA+ K FA EEISAQVLRKLV+DAS +L ++VT+AV+ VPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAA L+YG +K+NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK++EGIDL KD+QALQRLTE AEKAK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS+L+D+   PV
Sbjct:   99 KIACPALDKDFAPEEISAQVLRKLVEDASTYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAPLSYGLDKQNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQNEGIDLAKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRGKFEELCSNLIDKCSIPV 314          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_PORUM (Chaperone protein dnaK OS=Porphyra umbilicalis GN=dnaK PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.180e-92
Identity = 165/216 (76.39%), Postives = 194/216 (89.81%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPV 704
            ++ CPA+ K FA EEISAQVLRKLV+DAS +L ++VT+AV+ VPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVS+LEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK+ EGIDL KD+QALQRLTE +EKAK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS L+D+   PV
Sbjct:   98 KIECPALNKDFAPEEISAQVLRKLVEDASTYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQSEGIDLGKDRQALQRLTEASEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRAKFEELCSRLIDKCSIPV 313          
BLAST of FC921666 vs. ExPASy Swiss-Prot
Match: DNAK_PORPU (Chaperone protein dnaK OS=Porphyra purpurea GN=dnaK PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.180e-92
Identity = 165/216 (76.39%), Postives = 194/216 (89.81%), Query Frame = 3
Query:   57 EVGCPAIGKQFAAEEISAQVLRKLVDDASKFLNDSVTKAVVAVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPV 704
            ++ CPA+ K FA EEISAQVLRKLV+DAS +L ++VT+AV+ VPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVS+LEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK+ EGIDL KD+QALQRLTE +EKAK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS L+D+   PV
Sbjct:   98 KIECPALNKDFAPEEISAQVLRKLVEDASTYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQSEGIDLGKDRQALQRLTEASEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRAKFEELCSRLIDKCSIPV 313          
The following BLAST results are available for this feature:
BLAST of FC921666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7S_PEA3.122e-11693.09Stromal 70 kDa heat shock-related protein, chlorop... [more]
HSP7S_SPIOL2.625e-11595.79Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK2_ANASP6.687e-9679.26Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK2_SYNY38.726e-9678.80Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK2_THEEB1.141e-9579.26Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK_EMIHU1.068e-9375.58Chaperone protein dnaK OS=Emiliania huxleyi GN=dna... [more]
DNAK_PORYE1.821e-9377.31Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_PORHA4.057e-9376.85Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]
DNAK_PORUM1.180e-9276.39Chaperone protein dnaK OS=Porphyra umbilicalis GN=... [more]
DNAK_PORPU1.180e-9276.39Chaperone protein dnaK OS=Porphyra purpurea GN=dna... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32107H10EF RVDevelopN Citrus clementina cDNA clone C32107H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921666 ID=FC921666; Name=FC921666; organism=Citrus clementina; type=EST; length=711bp
GATGAGGAATCGAAGCAGGTTTCGTATAGAGTTGTGAGAGATGAGAATGG
GAATGTGAAGTTGGCTGTCCTGCTATCGGCAAGCAGTTTGCTGCTGAAGA
GATTTCGGCCCAGGTCTTGAGAAAGCTTGTCGATGATGCGTCCAAGTTCT
TAAATGATAGTGTGACTAAAGCAGTGGTCGCAGTGCCTGCTTACTTCAAT
GATTCCCAGAGAACAGCAACAAAGGATGCTGGTCGAATTGCTGGCTTAGA
TGTTCTGCGTATAATTAATGAGCCTACTGCTGCTTCGTTGGCATATGGAT
TTGAAAAGAAAAACAACGAGACCATCCTAGTGTTTGACCTTGGTGGTGGT
ACTTTTGATGTTTCAGTCCTTGAGGTCGGTGATGGAGTGTTTGAAGTGCT
CTCCACCTCAGGCGATACGCATTTGGGTGGTGATGATTTTGATAAGAGGA
TTGTTGATTGGCTTGCTTCAAACTTCAAGAGAGATGAAGGCATAGATCTT
TTGAAGGACAAACAAGCTCTTCAGCGTCTAACTGAGACGGCTGAGAAGGC
TAAGATGGAGCTGTCATCTTTGACTCAAACAAACATCAGCTTGCCTTTCA
TTACTGCTACTGCAGATGGGCCGAAGCATATTGACACCACCCTTACGAGG
GTTAAGTTTGAGGAATTGTGTTCAGACCTACTGGACAGGCTCAAGACGCC
TGTTGAAACTT
back to top