FC921669

Overview
NameFC921669
Unique NameFC921669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC921669 vs. ExPASy Swiss-Prot
Match: NOTUM_MOUSE (Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11
Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 3 
Query:  282 CLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKT--RLGSSKQMVKVVAFSGTLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQ 656
            C DGSP  Y+  +  G+    WL+ +EGG +C N   C  R  T  RL SSK        +G LS++ + NP ++N N + + YC    ++G     +  N   F G+ + Q V+ +L+ KG+  A+
Sbjct:  108 CNDGSPAGYYLKESKGS--RRWLLFLEGGWYCFNRENCDSRYSTMRRLMSSKDWPHTRTGTGILSSQPEENPHWWNANMVFIPYCSSDVWSG-ASPKSDKNEYAFMGSLIIQEVVRELLGKGLSGAK 231
[Close]
BLAST of FC921669 vs. ExPASy Swiss-Prot
Match: NOTUM_HUMAN (Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 3 
Query:  282 CLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKT--RLGSSKQMVKVVAFSGTLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQ 656
            C DGSP  Y+  +  G+    WL+ +EGG +C N   C  R  T  RL SS+   +    +G LS++ + NP ++N N + + YC    ++G   + +  N   F GA + Q V+ +L+ +G+  A+
Sbjct:  101 CNDGSPAGYYLKESRGS--RRWLLFLEGGWYCFNRENCDSRYDTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSG-ASSKSEKNEYAFMGALIIQEVVRELLGRGLSGAK 224
The following BLAST results are available for this feature:
BLAST of FC921669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NOTUM_MOUSE1.014e-1132.28Protein notum homolog OS=Mus musculus GN=Notum PE=... [more]
NOTUM_HUMAN1.325e-1131.50Protein notum homolog OS=Homo sapiens GN=NOTUM PE=... [more]
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Properties
Property NameValue
Genbank descriptionC32108A02EF RVDevelopN Citrus clementina cDNA clone C32108A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921669 ID=FC921669; Name=FC921669; organism=Citrus clementina; type=EST; length=707bp
GGAACAAGAAGCTAGCTACATCCTTTGATCCTTTCTCCTTGAGCTCCCAA
AAAATTGCCATTACTATTTCTTCCCAATGCACTAACTTGGGCTCCTTTTG
CATACTCTTTAAACTAGTCCCATTTGCAGATAATTTTTTTTTTTGGCCTC
ATTTCAGAATGGTTGCTGCAAGAATGGGCCAATGGTTGAATCTTTTAGTA
TGTGCACTCATATTACTGAAAGCTGACGGCTTTAATGTAGGAGTCACTTA
TGTTGAGAATGCTGTAGCGAAAGGAGCTGTTTGTTTGGATGGTAGCCCGC
CTGCTTACCATTTTGATAAGGGGTTTGGTGCTGGGATCAATAATTGGTTG
GTTCACATTGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGTCTTGA
ACGTAAGAAAACCCGTTTAGGTTCATCTAAGCAAATGGTCAAGGTAGTTG
CTTTCTCTGGGACGCTGAGCAACAAGCAAAAATTTAACCCAGACTTCTAC
AATTGGAATAGAATCAAGGTTAGATACTGTGATGGTGCATCGTTTACTGG
AGATGTGGAGGCTGTCAATCCAGCAAATAACCTTCACTTCAGAGGAGCAA
GGGTTTTTCAAGCTGTCATGGAGGATCTAATGGCTAAAGGGATGAAAAAT
GCTCAAAAATGCTGTTCTTTCTGGCTGCTCAGCTGGGGGGTTGACTTCAT
TTTGCAT
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