FC921671

Overview
NameFC921671
Unique NameFC921671
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLV-VTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV TLGP SRSVE+    L AGM+VARF+FS G   YHQETL NLK A+ +T  LCAVMLDT GPE+     K   PI L   + V +T D D +    ++ +++  L   +K G+TI        G  T +V+    D D   V C+ +N+A L  +   +++  + +DLPTLT
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSD----GTITLTVL--SCDPDAGTVRCRCENTATLGER-KNVNLPGVVVDLPTLT 192          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.213e-24
Identity = 70/177 (39.55%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTE-HPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV TLGP SR+V ++   L AGM+VARF+FS G   YHQETL+NLKIA+++T+ LCAVMLDT GPE+     T+  PI L   + + ++ D   +    ++ +++  L   +K G+TI        G  T +V+    D     V C+ +N+A L  +   +++  + +DLPTLT
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCAD----GTITLTVL--SCDPPSGTVRCRCENTATLGER-KNVNLPGVVVDLPTLT 191          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 68/177 (38.42%), Postives = 104/177 (58.76%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLV-VTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV TLGP SRSV +I   L AGM+VARF+FS G   YHQET++NL+ A++ST  LCAVMLDT GPE+     K   P+ L   + + ++ D   +   +++ +++  L++ VK    I     L    + T  +L     +G D  C+ +N+A+L  +   +++  + +DLPTLT
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVI-----LCADGQITFTVLSCDKENGLD-RCRCENTAVLGER-KNVNLPGVIVDLPTLT 189          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLV-VTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV TLGP SRSV ++   L AGMSVARF+FS G   YHQETL+NL+ A+ +T  LCAVMLDT GPE+     K   PI L   + + ++ D D +     + +++  L++ V        G  +   + T S+ +   D +   V C+ +N+++L  +   +++  + +DLPTLT
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNP------GMVILCADGTISLKVLSCDKEKGTVRCRCENTSMLGER-KNVNLPGVVVDLPTLT 178          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 54/176 (30.68%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVV-TKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTL 685
            TKIV T+GP++ S E++S  L+AGM+V R +FS GD A H + ++NL+  +  T K  A++LDT GPE+  +  +  + +SL A ++   T D+     + ++ + + G +  +  G+T+ +   L        + +EVT ++G  V+C++ N+  L      +++  + I LP L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGEN-KGVNLPGVSIALPAL 170          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.641e-19
Identity = 54/176 (30.68%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVV-TKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTL 685
            TKIV T+GP++ S E++S  L+AGM+V R +FS GD A H + ++NL+  +  T K  A++LDT GPE+  +  +  + +SL A ++   T D+     + ++ + + G +  +  G+T+ +   L        + +EVT ++G  V+C++ N+  L      +++  + I LP L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGEN-KGVNLPGVSIALPAL 170          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 54/176 (30.68%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVV-TKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTL 685
            TKIV T+GP++ S E+++  L+AGM+V R +FS GD A H + ++NL+  +  T K  A++LDT GPE+  +  +  + +SL A ++   T D+     S ++ + + G +  +  G+T+ +   L        + +EVT ++G  V+C++ N+  L      +++  + I LP L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGEN-KGVNLPGVSIALPAL 170          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 54/176 (30.68%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVV-TKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTL 685
            TKIV T+GP++ S E+++  L+AGM+V R +FS GD A H + ++NL+  +  T K  A++LDT GPE+  +  +  + +SL A ++   T D+     S ++ + + G +  +  G+T+ +   L        + +EVT ++G  V+C++ N+  L      +++  + I LP L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDLGEN-KGVNLPGVSIALPAL 170          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 51/185 (27.57%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  140 PTFFPAMTKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLV--VTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDVDGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            PT     TKIV T+GP++ S E +   +  GM+V R +FS G   YH + ++N++ A++ T K+ A+MLDT GPE+    +      + L   + +++  + ++  TS  + I++ GL  +VK      +G Y+   +   S+ +   + +   VVC++ N++ L      +H+    ++LP ++
Sbjct:   15 PTSTFVRTKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVK------VGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGEN-KNVHLPGAIVNLPAVS 192          
BLAST of FC921671 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 59/178 (33.15%), Postives = 94/178 (52.81%), Query Frame = 2
Query:  161 TKIVGTLGPRSRSVEIISGCLNAGMSVARFDFSWGDTAYHQETLENLKIAIKSTKKLCAVMLDTIGPELLVVTKTEHPISLLADESVVLTPDQDKEATSNLLPINFSGLSKAVKKGDTIFIGQYLFTGNETTSVMLEVTDV--DGEDVVCQIKNSAILARQLYTLHVSQIRIDLPTLT 688
            TKIV T+GP S SVE ++  + AGM+VAR +FS GD   H   ++N++ A     K   ++LDT GPE+   T     I L A   ++++ D +   T + + + + GL   V  G TI +   L        V LEVTD+  D  ++V ++ NS  L +    ++V  + ++LP +T
Sbjct:    4 TKIVCTIGPASESVEKLTQLMEAGMNVARLNFSHGDFEEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGSIELAAGSQLIVSMD-EVIGTPDKISVTYDGLIHDVSVGSTILLDDGL--------VGLEVTDINKDKREIVTKVMNSGTL-KNKKGVNVPGVSVNLPGIT 171          
The following BLAST results are available for this feature:
BLAST of FC921671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
KPYC_SOYBN1.174e-2542.37Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU2.213e-2439.55Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_TOBAC1.874e-2338.42Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH2.447e-2337.85Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK1_SALTY1.641e-1930.68Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI1.641e-1930.68Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI3.657e-1930.68Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO573.657e-1930.68Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK_DICDI1.301e-1627.57Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_BACLI2.218e-1633.15Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]

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Properties
Property NameValue
Genbank descriptionC32108A04EF RVDevelopN Citrus clementina cDNA clone C32108A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921671 ID=FC921671; Name=FC921671; organism=Citrus clementina; type=EST; length=690bp
AGATCAACAACAAACGAAAATCAAAATTTCTTTCTCAATTTCGTTGAAAT
ATTAAAAAAATAAAGAAAATAAAATGCCTTCAAATAATTTACTTCTTGAA
GAACCGATTAGAATGGCTTCAATTCTTGAGCCTTCAAAACCAACTTTCTT
TCCTGCAATGACGAAAATTGTTGGAACTCTTGGTCCAAGATCTCGAAGTG
TGGAGATAATATCTGGTTGCCTTAATGCAGGAATGTCAGTGGCAAGATTT
GATTTTTCATGGGGTGATACTGCATATCACCAGGAGACGCTTGAGAATCT
AAAGATAGCTATCAAGAGTACCAAGAAGCTTTGTGCGGTTATGTTAGACA
CAATTGGTCCAGAGTTGCTAGTTGTTACTAAGACTGAGCACCCCATTTCT
CTCCTTGCAGATGAGTCAGTTGTCCTTACACCAGATCAAGACAAAGAAGC
AACTTCAAATTTACTACCAATAAATTTTAGTGGACTGTCAAAGGCAGTGA
AGAAGGGAGATACCATATTTATTGGTCAATATCTTTTCACAGGAAATGAA
ACTACTTCAGTAATGTTGGAGGTCACCGACGTGGATGGTGAAGATGTGGT
TTGTCAGATAAAGAATTCTGCTATCTTGGCTCGGCAGTTGTATACCTTGC
ATGTCTCTCAAATTCGTATTGATCTGCCTACACTCACTGA
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