FC921690 | Citrus Genome Database

Overview


Name	FC921690
Unique Name	FC921690
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	683

Libraries


Library Name	Type
RVDevelopN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: EBF2_ARATH (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18
Identity = 63/212 (29.72%), Postives = 97/212 (45.75%), Query Frame = 2

Query:  101 EVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQST-------ERKKLSVRAGPHMLRK--------------IAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            +VL ++ L  IL RL   +++     V K WL+L S+       E     V  G   L +              IA   S    L   Q     F   VTD  L  +A G  SL++++L N   ++D G++ I      ++ LDLS C  +TD GL A+AE C +L  L +  C  + +  L+A+++ C NL  + ++ C  I D GV  L+
Sbjct:   56 DVLPEECLFEILRRLPSGQERSACACVSKHWLNLLSSISRSEVNESSVQDVEEGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLL 267

HSP 2 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 2

Query:  359 ADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNC-HNLEELGLQGCTSISD 652
            A G K LK L++ +C+G+TD G+ ++G+G   L+ + L+ C  ++ KGL A+A+    L SL L  C  I  + L     NC   L+   L  C  ISD
Sbjct:  321 AKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISD 419

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBL4_ARATH (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 62/210 (29.52%), Postives = 104/210 (49.52%), Query Frame = 2

Query:   95 INEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTERKKLSVRAG---PHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDL------AVIADGFKSLKLLNLQNC-------KGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLVM 676
            IN  L ++ +  I  RLE   +++   LVCKRWL L+   R  L + A       +  ++ RF  +  + + + +S S  P ++ S        +      K  KL +  +          +TD G+ ++ +G   +++L L +C  ++  GL ++A+ C  L+SL L GC  + D  L A+ K C  LEEL L+ C  ++D GVIDLV+
Sbjct:    7 INNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFLYITSIHVDERISVSL-PSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVV 214

HSP 2 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +R I     +L +L LS          V+   L  IA G K L+ + +  C  I   GI +IG     L+ L L YC+++ +  L  + +GC+ L  LHL  C  I D  + +++K C NL++L ++ C  I + G+I +
Sbjct:  312 MRAIGKGSKKLKDLTLSDCYF------VSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISI 445

HSP 3 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 38/110 (34.55%), Postives = 65/110 (59.09%), Query Frame = 2

Query:  332 VTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGV 661
            + +S L  I  G KSL++L+L +C GI D  + SI  G  +L+ L +  C ++ +KG+ ++ + C+ L  L L  C  + +  L A+ K C +L++L + GC  ISD+G+
Sbjct:  385 IGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGI 493

HSP 4 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 2

Query:  332 VTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            VTD   A + +   SL+ L L + +  TD G+ +IG G   L+ L LS C  ++ KGL A+A GC++L  + + GC +I    ++A+ K+C  L+EL L  C  I +S + ++
Sbjct:  281 VTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEI 393

HSP 5 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 39/114 (34.21%), Postives = 65/114 (57.02%), Query Frame = 2

Query:  329 GVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            G+ D  +  IA G ++LK L+++ C  I + GI SIG    SL  L L +C K+ +K L A+ +GC  L+ L+++GC  I+D  + A+++ C  L  L +    +I D  + +L
Sbjct:  410 GIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAEL 522

HSP 6 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = 2

Query:  332 VTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGV 661
            + D  L  +A G   LK L LQ C  +TD   A++G    SL+ L L   +  TDKG+ A+ +G + L+ L L+ C  ++   L+A++  C  LE + + GC +I   G+
Sbjct:  256 IHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGI 364

HSP 7 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 53/156 (33.97%), Postives = 72/156 (46.15%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            KKL +R     G   +  I      L EL L       F   V +  L  I  G  SL+ LN+  C  I+DAGI +I  G   L  LD+S  + + D  L+ + EGC  L+ L L+ C  ITD  L  L + C  LE   +  C  I+ +GV  +V
Sbjct:  427 KKLHIRRCYEIGNKGIISIGKHCKSLTELSLR------FCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVV 575

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBL5_ARATH (F-box/LRR-repeat protein 5 OS=Arabidopsis thaliana GN=FBL5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 62/205 (30.24%), Postives = 105/205 (51.22%), Query Frame = 2

Query:   80 MGSLCINEVLRDDELRSILSRLE----DDKDKERFGLVCKRWLHLQSTERKKLSVRAGPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNC-KGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLVMA 679
            M SL ++   +  +L++++ R +    +D   E     C     L  ++  K++     H L  +A   + L +L+LS   S S      D+ LA +    + LK+LNL  C + ++D  + +IG     LQSL+L +C  ++D G+ ++A GC DLR+L L  C  ITD ++ AL+  C +L  LGL  C +I+D  +  L  +
Sbjct:   78 MNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKIT----DHSLYSLARGCTNLTKLNLSGCTSFS------DTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQS 272

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBXL2_MOUSE (F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 48/155 (30.97%), Postives = 83/155 (53.55%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +KLS+R     G   L+  A     +  L+L+          +TDS    ++     LK L+L +C  +T++ +  I  G  +L+ L+LS+C ++T +G+ A+  GC+ L++L L GC  + D  L+ +  +CH L  L LQ C+ I+D GV+ +
Sbjct:   81 RKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTK------ITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQI 229

HSP 2 Score: 82.8037 bits (203), Expect = 1.846e-15
Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 2

Query:  275 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            S+L  LDL+  VS      VT+S L  I++G ++L+ LNL  C  IT  GI ++  G   L++L L  C +L D+ L  +   C +L SL+L  C  ITD  +  + + CH L+ L L GC++++D+ +  L
Sbjct:  130 SKLKHLDLTSCVS------VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTAL 255

HSP 3 Score: 82.4185 bits (202), Expect = 2.410e-15
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            L+ I      LV L+L QS SR     +TD  +  I  G   L+ L L  C  +TDA + ++G     LQ L+ + C  LTD G + +A  C +L  + L  C  ITD TL  LS +C  L+ L L  C  I+D G++ L
Sbjct:  200 LKHIQNHCHELVSLNL-QSCSR-----ITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHL 333

HSP 4 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 2

Query:  338 DSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            D  L  I +    L  LNLQ+C  ITD G+  I  G   LQ+L LS C  LTD  L+A+   C  L+ L  A C  +TD     L++NCH LE++ L+ C  I+DS ++ L
Sbjct:  197 DEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQL 307

HSP 5 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 32/99 (32.32%), Postives = 57/99 (57.58%), Query Frame = 2

Query:  377 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            L+ L+L+ C G+ D+ + +      +++ L+L+ C K+TD    +++  C  L+ L L  C S+T+ +L+ +S+ C NLE L L  C  I+  G+  LV
Sbjct:   80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALV 178

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBXL2_BOVIN (F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16
Identity = 50/155 (32.26%), Postives = 80/155 (51.61%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +KLS+R     G   L+  A     +  L+L+          +TDS    ++     LK L+L +C  IT++ +  I  G   L+ L+LS+C ++T  G+ A+  GC+ LR+L L GC  + D  L+ +   CH L  L LQ C+ ++D GV+ L
Sbjct:   81 RKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTK------ITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQL 229

HSP 2 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 51/140 (36.43%), Postives = 70/140 (50.00%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            L+ I      LV L+L QS SR     VTD  +  +  G   L+ L L  C  +TDA + ++      LQ L+ + C  LTD G + +A  C DL  + L  C  ITD TL  LS +C  L+ L L  C  I+D G++ L
Sbjct:  200 LKHIQNYCHELVSLNL-QSCSR-----VTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHL 333

HSP 3 Score: 77.7962 bits (190), Expect = 5.937e-14
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 2

Query:  275 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLVM 676
            S+L  LDL+  VS      +T+S L  I++G + L+ LNL  C  IT  G+ ++  G   L++L L  C +L D+ L  +   C +L SL+L  C  +TD  +  L + C  L+ L L GC S++D+ +  L +
Sbjct:  130 SKLKHLDLTSCVS------ITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALAL 257

HSP 4 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 2

Query:  338 DSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            D  L  I +    L  LNLQ+C  +TD G+  +  G   LQ+L LS C  LTD  L+A+A  C  L+ L  A C  +TD     L++NCH+LE++ L+ C  I+D  +  L
Sbjct:  197 DEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQL 307

HSP 5 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 2

Query:  377 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            L+ L+L+ C G+ D+ + +      +++ L+L+ C K+TD    +++  C  L+ L L  C SIT+ +L+ +S+ C +LE L L  C  I+  GV  LV
Sbjct:   80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALV 178

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBXL2_PONAB (F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +KLS+R     G   L+  A     +  L+L+          +TDS    ++     LK L+L +C  IT++ +  I  G  +L+ L+LS+C ++T  G+ A+  GC+ L++L L GC  + D  L+ +   CH L  L LQ C+ I+D GV+ +
Sbjct:   81 RKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTK------ITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQI 229

HSP 2 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 2

Query:  275 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            S+L  LDL+  VS      +T+S L  I++G ++L+ LNL  C  IT  GI ++  G   L++L L  C +L D+ L  +   C +L SL+L  C  ITD  +  + + CH L+ L L GC++++D+ +  L
Sbjct:  130 SKLKHLDLTSCVS------ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL 255

HSP 3 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 2

Query:  338 DSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            D  L  I +    L  LNLQ+C  ITD G+  I  G   LQ+L LS C  LTD  L+A+   C  L+ L  A C  +TD     L++NCH LE++ L+ C  I+DS +I L
Sbjct:  197 DEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQL 307

HSP 4 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            L+ I      LV L+L QS SR     +TD  +  I  G   L+ L L  C  +TDA + ++G     LQ L+ + C  LTD G + +A  C +L  + L  C  ITD TL  LS +C  L+ L L  C  I+D G++ L
Sbjct:  200 LKHIQNYCHELVSLNL-QSCSR-----ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHL 333

HSP 5 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 2

Query:  377 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            L+ L+L+ C G+ D+ + +      +++ L+L+ C K+TD    +++  C  L+ L L  C SIT+ +L+ +S+ C NLE L L  C  I+  G+  LV
Sbjct:   80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALV 178

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBXL2_HUMAN (F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +KLS+R     G   L+  A     +  L+L+          +TDS    ++     LK L+L +C  IT++ +  I  G  +L+ L+LS+C ++T  G+ A+  GC+ L++L L GC  + D  L+ +   CH L  L LQ C+ I+D GV+ +
Sbjct:   81 RKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTK------ITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQI 229

HSP 2 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 2

Query:  275 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            S+L  LDL+  VS      +T+S L  I++G ++L+ LNL  C  IT  GI ++  G   L++L L  C +L D+ L  +   C +L SL+L  C  ITD  +  + + CH L+ L L GC++++D+ +  L
Sbjct:  130 SKLKHLDLTSCVS------ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTAL 255

HSP 3 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 2

Query:  338 DSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            D  L  I +    L  LNLQ+C  ITD G+  I  G   LQ+L LS C  LTD  L+A+   C  L+ L  A C  +TD     L++NCH LE++ L+ C  I+DS +I L
Sbjct:  197 DEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQL 307

HSP 4 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            L+ I      LV L+L QS SR     +TD  +  I  G   L+ L L  C  +TDA + ++G     LQ L+ + C  LTD G + +A  C +L  + L  C  ITD TL  LS +C  L+ L L  C  I+D G++ L
Sbjct:  200 LKHIQNYCHELVSLNL-QSCSR-----ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHL 333

HSP 5 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 2

Query:  377 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            L+ L+L+ C G+ D+ + +      +++ L+L+ C K+TD    +++  C  L+ L L  C SIT+ +L+ +S+ C NLE L L  C  I+  G+  LV
Sbjct:   80 LRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALV 178

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.669e-16
Identity = 69/197 (35.03%), Postives = 96/197 (48.73%), Query Frame = 2

Query:  101 EVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTERKK-LSVRAGPHMLRKIAARFSRLVEL--DLSQSVSRSFY-PGVTDSDLAVIADGFKSLKLLNLQNCKG-----ITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVI 664
            +VL D+ L  I  RL   +++     V K+WL L S+ R+K + V              S++ E   D    +SRS      TD  LA IA G      L   + +G     ++D G+ SIG    SL SL L     +TD GL  +AEGC  L  L L  C +ITD  L A++K+C NL EL L+ C+ I D G++
Sbjct:   65 DVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVP-------------SKITEDGDDCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLL 248

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FBL12_ARATH (F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16
Identity = 63/230 (27.39%), Postives = 103/230 (44.78%), Query Frame = 2

Query:  107 LRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTERKKLSVRAG-----------------PHMLRKIAARFSRLVELDLS-------QSVSRSFYPG-------------VTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLE----ELGLQGCTSISDSGVIDLV 673
            L DD L  I  RL+   D + FGL C RWL++Q+  R+ L  +                    H L ++  RF  L  L LS        S+    YPG             ++D  ++ IA    +L +++L  C  I+D G+ ++     SL+ ++LSYC  ++D G+ A+++ C  L S+ ++ CKSIT       S     ++    +L  +G T I   G I+ +
Sbjct:   18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFL 246

[Close]

BLAST of FC921690 vs. ExPASy Swiss-Prot
Match: FXL20_MOUSE (F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.284e-16
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 2

Query:  338 DSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            D  L  I      L  LNLQ C  ITD G+ +I  G   LQSL  S C  +TD  L+A+ + C  LR L +A C  +TD     L++NCH LE++ L+ C  I+DS +I L
Sbjct:  210 DEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQL 320

HSP 2 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 2

Query:  251 LRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGV 661
            L+ I A    LV L+L   +       +TD  L  I  G   L+ L    C  ITDA + ++G     L+ L+++ C +LTD G + +A  C +L  + L  C  ITD TL  LS +C  L+ L L  C  I+D G+
Sbjct:  213 LKYIGAHCPELVTLNLQTCLQ------ITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI 343

HSP 3 Score: 77.411 bits (189), Expect = 7.754e-14
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 2

Query:  329 GVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGV 661
            GV D+ L   A   +++++L+L  C   TDA   S+      L+ LDL+ C  +T+  L A++EGC  L  L+++ C  +T   +QAL + C  L+ L L+GCT + D  +
Sbjct:  103 GVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEAL 213

HSP 4 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 2

Query:  296 LSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            L + ++ S+   VT   +  +  G   LK L L+ C  + D  +  IG+    L +L+L  C ++TD+GL  +  GC  L+SL  +GC +ITD  L AL +NC  L  L +  C+ ++D G   L
Sbjct:  170 LLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTL 294

HSP 5 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 45/155 (29.03%), Postives = 77/155 (49.68%), Query Frame = 2

Query:  218 KKLSVRA----GPHMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDL 670
            +KLS+R     G + LR  A     +  L L+           TD+    ++     L+ L+L +C  IT+  + ++  G   L+ L++S+C ++T  G+ A+  GC  L++L L GC  + D  L+ +  +C  L  L LQ C  I+D G+I +
Sbjct:   94 RKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTK------TTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITI 242

HSP 6 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 2

Query:  275 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDS 655
            S+L  LDL+   S      +T+  L  +++G   L+ LN+  C  +T  GI ++  G   L++L L  C +L D+ L  +   C +L +L+L  C  ITD  L  + + CH L+ L   GC++I+D+
Sbjct:  143 SKLRHLDLASCTS------ITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDA 263

HSP 7 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 2

Query:  377 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSITDWTLQALSKNCHNLEELGLQGCTSISDSGVIDLV 673
            L+ L+L+ C G+ D  + +      +++ L L+ C K TD   +++++ C  LR L LA C SIT+ +L+ALS+ C  LE+L +  C  ++  G+  LV
Sbjct:   93 LRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALV 191

The following BLAST results are available for this feature:

BLAST of FC921690 vs. ExPASy Swiss-Prot

BLAST of FC921690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35


Match Name	E-value	Identity	Description
EBF2_ARATH	3.042e-18	29.72	EIN3-binding F-box protein 2 OS=Arabidopsis thalia...	[more]
FBL4_ARATH	5.189e-18	29.52	F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana...	[more]
FBL5_ARATH	4.393e-17	30.24	F-box/LRR-repeat protein 5 OS=Arabidopsis thaliana...	[more]
FBXL2_MOUSE	5.737e-17	30.97	F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl...	[more]
FBXL2_BOVIN	1.278e-16	32.26	F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 ...	[more]
FBXL2_PONAB	1.669e-16	31.61	F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL...	[more]
FBXL2_HUMAN	1.669e-16	31.61	F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL...	[more]
EBF1_ARATH	1.669e-16	35.03	EIN3-binding F-box protein 1 OS=Arabidopsis thalia...	[more]
FBL12_ARATH	2.180e-16	27.39	F-box/LRR-repeat protein 12 OS=Arabidopsis thalian...	[more]
FXL20_MOUSE	8.284e-16	41.44	F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbx...	[more]

Pages

Properties


Property Name	Value
Genbank description	C32108C01EF RVDevelopN Citrus clementina cDNA clone C32108C01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC921690 ID=FC921690; Name=FC921690; organism=Citrus clementina; type=EST; length=683bp
AATCGAGGGACAGAGATTAAGAATAGGGGTTTCCGGAATCAACGCTAATC
TGAACTGAACTCCTTTTGAAATTAATCAAATGGGTTCCCTTTGCATAAAC
GAAGTGCTCAGAGACGACGAATTGCGATCGATTTTGTCAAGGCTAGAAGA
TGACAAGGACAAGGAGAGATTCGGGTTGGTGTGTAAGAGATGGCTCCACT
TGCAGAGCACTGAGCGGAAGAAATTGTCAGTACGAGCTGGGCCCCACATG
CTCAGAAAGATTGCCGCCAGATTCTCTCGCCTCGTTGAATTGGATTTGTC
TCAGTCCGTTTCCAGGTCGTTTTATCCCGGTGTCACTGATTCTGATCTTG
CTGTTATTGCTGATGGGTTCAAGTCTTTGAAGCTCCTTAATTTGCAGAAT
TGTAAAGGTATTACAGATGCTGGAATTGCATCAATTGGAAGTGGTCTTTG
TTCTTTACAGTCCTTGGATCTGTCTTACTGTAGAAAGCTAACTGATAAGG
GATTGTCAGCTGTTGCTGAAGGCTGTCAAGACCTGCGGAGCCTGCATCTT
GCTGGCTGTAAATCCATAACTGATTGGACATTACAAGCTCTTTCAAAGAA
CTGTCATAATCTAGAAGAGTTGGGCCTTCAAGGATGCACCAGTATAAGTG
ACTCCGGAGTAATTGATCTTGTAATGGCTGTCA