FC921697

Overview
NameFC921697
Unique NameFC921697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 375.941 bits (964), Expect = 1.198e-103
Identity = 179/209 (85.65%), Postives = 195/209 (93.30%), Query Frame = 3
Query:   90 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIASIL 716
            +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLVT+LAARAFGAPRI++ DVD QRL+IA  L
Sbjct:   19 ENMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDL 227          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 106/208 (50.96%), Postives = 144/208 (69.23%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP +G+L     H A  CYKLPDNV+ EEGAM EPLSVG+HACRR  V     V++ G+GPIG+VTLL A+A GA ++++TD+   RLS A
Sbjct:    6 KPSNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 4.174e-56
Identity = 104/208 (50.00%), Postives = 147/208 (70.67%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K +N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG+   +   CK+G YNL P + F  +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG+V+LL A+A GA ++++TD+   RLS A
Sbjct:    6 KPKNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 218.009 bits (554), Expect = 4.174e-56
Identity = 105/208 (50.48%), Postives = 144/208 (69.23%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG+VTLL A+A GA ++++TD+   RLS A
Sbjct:    6 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.343e-54
Identity = 102/208 (49.04%), Postives = 145/208 (69.71%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKPMV+GHE +G + +VGS V+ L+ GDRVA+EPG        CK G YNL P + F  +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIGLV+LLAA+A GA ++++TD+   RLS A
Sbjct:    5 KPENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKA 212          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 98/208 (47.12%), Postives = 145/208 (69.71%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++  R  +F+VKKPMV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F  +PP +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G+GP+G+VTLL A+A GA ++++TD+   RL+ A
Sbjct:    6 KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 210.69 bits (535), Expect = 6.664e-54
Identity = 98/208 (47.12%), Postives = 144/208 (69.23%), Query Frame = 3
Query:   84 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++  R  +F+VKKPMV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F  +PP +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G+GPIG+VTLL A+A GA ++++ D+   RL+ A
Sbjct:    6 KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 100/206 (48.54%), Postives = 143/206 (69.42%), Query Frame = 3
Query:   90 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKPMV+GHE +G + +VGS V+ L+ GDRVA++PG        CK G YNL P + F  +PP +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIGLV LLAA+A GA ++++TD+   RLS A
Sbjct:    6 ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKA 210          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 6.237e-52
Identity = 92/207 (44.44%), Postives = 138/207 (66.67%), Query Frame = 3
Query:   90 QNM-AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 707
            QNM AA +   + +KI+   +P +   +V +++ A+GICGSD+H++   R  N++V+KP ++GHECAG I  VGS V   +VGDRVA+EPG++CG C  CK G YNLCP+++F  +PP +G+    +       + +PD++S EE A+ EP SVG+HA  R  + P + + IMG GP+GL+ + AA+AFGA  II+TD++  RL  A
Sbjct:    7 QNMKAAVMHNTREIKIETLPVPDINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEIAAVGSSVDQFKVGDRVAVEPGVTCGRCEACKEGRYNLCPDVQFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAA 213          
BLAST of FC921697 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.203e-48
Identity = 94/213 (44.13%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   90 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIASILARMN 728
            +N AA L G   ++I+   +P +   +V ++I  +GICGSDV  + T  C   ++ KP+VIGHE AG + +VG +V SL VGDRVA+EP   C  C LCK G YNLC E R+  S    G+L     H A  C+KLPDN+++EEGA  +PL++ +HAC RA +   + ++I+G+GPIG++  ++A+A GA +II+TDV   RL  A  L   N
Sbjct:    3 ENYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADN 215          
The following BLAST results are available for this feature:
BLAST of FC921697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
IDND_VITVI1.198e-10385.65L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_PONAB3.196e-5650.96Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_MACFA4.174e-5650.00Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_HUMAN4.174e-5650.48Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_BOVIN1.343e-5449.04Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_MOUSE3.907e-5447.12Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_RAT6.664e-5447.12Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_SHEEP9.623e-5348.54Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_BACSU6.237e-5244.44Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]
DHSO_BOMMO3.203e-4844.13Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32108C09EF RVDevelopN Citrus clementina cDNA clone C32108C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921697 ID=FC921697; Name=FC921697; organism=Citrus clementina; type=EST; length=736bp
CCGGGGGTAAAAAGAAGACAAGAGGAGAAGAAAAAAAGGGAAACATTGAA
ATGGCTGAAGCAATCAGAGATGACGAAGGAGACAAGAATCAGAACATGGC
TGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATCATTTGC
CTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTTGGAATA
TGTGGAAGTGATGTTCATCACTTCAAGACTATGAGATGTGCCAATTTTAT
TGTGAAAAAACCTATGGTAATTGGACATGAGTGTGCTGGGATCATAGAAG
AAGTTGGCAGTGAAGTTAAGTCCCTTGAGGTGGGTGATCGTGTGGCTCTA
GAACCTGGTATTAGTTGCGGACACTGCAGTCTCTGCAAAGCTGGTAGCTA
TAATCTTTGCCCTGAAATGAGATTCTTTGGATCTCCTCCAACCAACGGCT
CTCTTGCCCATAAGGTTGTGCATCCAGCAAAGTTATGTTACAAGTTACCT
GACAATGTGAGCTTGGAGGAAGGAGCAATGTGTGAACCCTTAAGTGTTGG
TGTCCATGCCTGTCGCCGTGCAAATGTTGGACCTGAAACCAATGTAATGA
TCATGGGATCAGGACCGATAGGCCTTGTTACCCTGTTAGCTGCTCGAGCA
TTTGGTGCCCCCAGAATTATCATCACTGATGTTGATGTTCAGCGTCTATC
TATTGCAAGTATCTTGGCGCGGATGAACAGCTAAAG
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