FC921698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.818e-80 Identity = 147/204 (72.06%), Postives = 165/204 (80.88%), Query Frame = 3 Query: 117 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTLLLR----WKEXGYLR 716 M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQA+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AIA AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP GSDAS L T + WK G R Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKR 204
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_CAEEL (Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21 Identity = 50/142 (35.21%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 255 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 680 D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +GYGC G S G + E+ RVD+ + + V +SL + I GSE+QKQKY+P LA I C+ LTEP +GS+ + T Sbjct: 24 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMET 165
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 270 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 680 ++ LT++E +R R ++ + P ++ F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ + C+ LTEP GSD S++ T Sbjct: 57 EEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMET 193
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 279 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTLLLRWKEXGYL 713 +T E+ +R VR+ KEIAP E EK EFPF +I K+G + G + + YG G V +AI EI+R+ A+ + VH+S+ I G+EEQK KY+P+LA + + +ALTEP GSDA +L T ++ K YL Sbjct: 3 VTQEQVMMRKMVRDFARKEIAPA-AEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIK-KNGKYL 147
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 270 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 680 ++ LT++E +R R ++ + P ++ F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V S L M I GSEEQ+QKYLP LA+ + C+ LTEP GSD S++ T Sbjct: 57 EEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISQMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMET 193
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_BOVIN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 270 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 680 ++ LT++E +R R ++ + P ++ F +I ++G L + G TI+GY C G S + E+ RVD+ + + V SSL M I GSEEQKQKYLP LA+ + C+ LTEP +GSD S + T Sbjct: 57 EEQLTADEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGMLGPTIQGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKGELLGCFGLTEPNHGSDPSGMET 193
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 270 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 680 ++ LT++E+ +R R ++ + ++ F ++ ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ + C+ LTEP +GSD + T Sbjct: 57 EEQLTADEKLIRDTFRNYWQERLMSQILLANRNEVFHRDIVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMET 193
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 270 DDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE-QKQKYLPSLAQLNTIACWALTEPAYGSDASALNTLLL 689 ++ LT++E +R R ++ + P +V F +I ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I GSEE Q+QKYLP LA+ + C+ LTEP +GSD ++ T L Sbjct: 26 EEQLTADEILIRDTFRTYCQEHLMPRIVLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRAL 166
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: ACDS_CLOAB (Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum GN=bcd PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 3 Query: 279 LTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTL 683 LT E++ VR VRE E E+ PI E E FP + K+G + G K YG G V IA+ E+++V + + H+SL I G+EEQKQKYL LA+ I + LTEP G+D+ A T+ Sbjct: 5 LTREQELVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQTV 140
BLAST of FC921698 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 207 AFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMVEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTLLLRWKEXGYL 713 +F P KF +D + LLT EE +R +V + + E+ P + + +F ++ + G + + G TI YG H G E +VD+ + + V SSL M I G++ QK KYL LA + + C+ LTEP GSD + + T ++ Y+ Sbjct: 27 SFGTIVPGDKFE--WNDPLSLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDREIMREYGKMGMLGATIPAYGGVSHVAYGLMANAVE--KVDSGYRSAMSVQSSLVMHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYV 191 The following BLAST results are available for this feature:
BLAST of FC921698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921698 ID=FC921698; Name=FC921698; organism=Citrus clementina; type=EST; length=727bpback to top |