FC921702

Overview
NameFC921702
Unique NameFC921702
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 7.359e-111
Identity = 189/226 (83.63%), Postives = 200/226 (88.50%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++  +NE                     LQNLCGGPNI+KLLDIVRDQ SKTPSLIFE+VNNTDFKVLYPTL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA+ LG
Sbjct:   20 DYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 394.045 bits (1011), Expect = 4.038e-109
Identity = 186/226 (82.30%), Postives = 198/226 (87.61%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYESL VQWGEQDDYEVVRKVGRGKYSEVFEG++  +NE                     LQNLCGGPNI+KLLD+VRDQ SKTPSLIFE+VN+TDFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN DQLVKIA+ LG
Sbjct:   20 DYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGINMNNNEKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLG 245
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 390.963 bits (1003), Expect = 3.418e-108
Identity = 185/226 (81.86%), Postives = 196/226 (86.73%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYESL VQWGEQDDYEVVRKVGRGKYSEVFEG++    E                     LQNLCGGPNI+KLLD+VRDQ SKTPSLIFE+VN+TDFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN DQLVKIA+ LG
Sbjct:   20 DYESLIVQWGEQDDYEVVRKVGRGKYSEVFEGINVNSKEKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLG 245
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 7.128e-106
Identity = 181/226 (80.09%), Postives = 193/226 (85.40%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYESL VQWG QDDYEVVRKVGRGKYSEVFEG +   NE                     LQNLCGGPNI+KL DIVRD+ SKTPSL+FE VN+ DFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMIDH+ RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA+ LG
Sbjct:   20 DYESLVVQWGHQDDYEVVRKVGRGKYSEVFEGKNVNTNERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPSLVFEFVNSVDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHQLRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG 245
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_MOUSE (Casein kinase II subunit alpha OS=Mus musculus GN=Csnk2a1 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
[Close]
BLAST of FC921702 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.347e-96
Identity = 164/226 (72.57%), Postives = 186/226 (82.30%), Query Frame = 2 
Query:    2 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARCLG 679
            DYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+IA+ LG
Sbjct:   25 DYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 250
The following BLAST results are available for this feature:
BLAST of FC921702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK2A_MAIZE7.359e-11183.63Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK22_ARATH4.038e-10982.30Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK21_ARATH3.418e-10881.86Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
CSK23_ARATH7.128e-10680.09Probable casein kinase II subunit alpha OS=Arabido... [more]
CSK21_XENLA1.347e-9672.57Casein kinase II subunit alpha OS=Xenopus laevis G... [more]
CSK21_RAT1.347e-9672.57Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_MOUSE1.347e-9672.57Casein kinase II subunit alpha OS=Mus musculus GN=... [more]
CSK21_HUMAN1.347e-9672.57Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_CHICK1.347e-9672.57Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
CSK21_BOVIN1.347e-9672.57Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]

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Properties
Property NameValue
Genbank descriptionC32108D02EF RVDevelopN Citrus clementina cDNA clone C32108D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921702 ID=FC921702; Name=FC921702; organism=Citrus clementina; type=EST; length=709bp
GGACTACGAGTCCCTCACCGTTCAGTGGGGGGAGCAGGATGATTACGAGG
TGGTGAGAAAGGTTGGGAGGGGGAAATATAGTGAAGTGTTTGAAGGCGTG
CACTGCACTGATAATGAAAAGTGTATTATTAAGATTCTTAAGCCTGTTAA
GAAGAAGAAGATTAAGAGGGAGATAAAAATACTTCAGAATCTTTGTGGTG
GACCGAATATTATCAAGTTGCTTGATATTGTACGAGACCAGCAATCAAAG
ACCCCAAGTCTTATATTTGAACATGTGAATAATACAGATTTTAAAGTGCT
TTATCCAACACTCTCGGACTATGATGTTCGGTATTACATCTATGAACTTC
TAAAGGCATTGGATTACTGCCACTCACAAGGCATAATGCATCGAGATGTG
AAGCCCCATAATGTGATGATTGATCATGAGCAAAGGAAACTTCGTCTTAT
AGATTGGGGTCTTGCAGAGTTTTATCATCCTGGCAAAGAATATAATGTTC
GTGTTGCTTCAAGATACTTTAAAGGTCCTGAGCTTCTTGTTGATCTGCAA
GATTATGATTATTCTTTAGACTTATGGAGTCTTGGTTGTATGTTTGCTGG
AATGATATTTCGTAAGGAGCCTTTCTTCTATGGGCATGATAATTATGATC
AGTTGGTCAAAATTGCCAGGTGCTTGGGACAGATGAGTTAATGCATCCCC
TGATAGTAC
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