FC921717

Overview
NameFC921717
Unique NameFC921717
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_XENTR (WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40
Identity = 88/222 (39.64%), Postives = 136/222 (61.26%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E+AHE+++W+V W   +     L+++GSLD+ VK+W+  D +LE  +T  GH LGVVSV   PSG I AS+SLD+ +R++D+++   I  ++A P + W + F P    LA  G     V ++   T             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +Y+
Sbjct:   12 EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLAT-GSHVGKVNIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYE 218          

HSP 2 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 54/212 (25.47%), Postives = 96/212 (45.28%), Query Frame = 3
Query:   75 WAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            W+V + P ++     L TGS    V ++  +  + E +       ++S+A  P G   AS ++D  + +FD+ T   + TLE     +  + F P  + L V       +K+++    +L ATLS                 +VL+VA+SPD       S D ++ V+DV+    +H    H   V  + Y+    +++ S +DD  +H+YD
Sbjct:  110 WSVAFSPDSQH----LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYEVQHASLAATLS-------------GHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIV-SVADDQEIHVYD 302          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_CHICK (WD repeat-containing protein 61 OS=Gallus gallus GN=WDR61 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.159e-39
Identity = 86/222 (38.74%), Postives = 135/222 (60.81%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E AH++++W+V W    +     +++GSLD+ VK+W+ +D  + L+ T  GH LGVVSV    +G IAAS+SLD+ +R++D++T   I +++A P + W + F P    LA  G     V ++   T             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLAT-GSHVGKVNIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_DANRE (WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.514e-39
Identity = 85/222 (38.29%), Postives = 135/222 (60.81%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD--MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E+AHE+++W   W  + +     ++TGSLD+ VK+W+  D  ++L+ T  GH LGVVSV    +G IAAS+SLD+ +R++D++T   I +++A P + W + F P    +A  G     V ++   +             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIAT-GSHLGKVNIFGVES-------------GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          

HSP 2 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 60/224 (26.79%), Postives = 101/224 (45.09%), Query Frame = 3
Query:   39 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            +KS++ A     W V + P ++     + TGS    V ++  +  + E +       ++S+A  P G   AS ++D  + +FD+ T   + TLE     +  + F P  + L V       +K++D    NL  TLS                 +VLSVA+SPD       S D +I V+D +    ++    H   V S+ Y+P   +++ SA DD  +H+YD
Sbjct:   99 IKSMD-AGPVDAWTVAFSPDSK----YIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLS-------------GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIV-SAGDDRAIHIYD 302          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_XENLA (WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39
Identity = 87/222 (39.19%), Postives = 134/222 (60.36%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLER--TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E+AHE+++W+V W   +     L+++GSLD+ VK+W+  D +LE      GH LGVVSV   PSG I AS+SLD+ +R++D+++   I +++A P + W + F P    LA  G     V ++   T             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +S  D ++L +ASDD ++ +YD
Sbjct:   12 EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLAT-GSHVGKVNIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-TDSQLLVTASDDGYIKIYD 218          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_BOVIN (WD repeat-containing protein 61 OS=Bos taurus GN=WDR61 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37
Identity = 83/222 (37.39%), Postives = 132/222 (59.46%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E AH++++W+V W    +     ++TGSLD+ VK+W  R + + L+ +  GH LGVVSV    +  IAAS+SLD+ +R++D++    I +++A P + W + F P    LA  G     V ++   +             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT-GTHVGKVNIFGVES-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_HUMAN (WD repeat-containing protein 61 OS=Homo sapiens GN=WDR61 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.033e-37
Identity = 83/222 (37.39%), Postives = 132/222 (59.46%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E AH++++W+V W    +     ++TGSLD+ VK+W  R + + L+ +  GH LGVVSV    +  IAAS+SLD+ +R++D++    I +++A P + W + F P    LA  G     V ++   +             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLAT-GTHVGKVNIFGVES-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_RAT (WD repeat-containing protein 61 OS=Rattus norvegicus GN=Wdr61 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.186e-37
Identity = 82/222 (36.94%), Postives = 133/222 (59.91%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E AH++++W+V W    +     ++TGSLD+ VK+W  R + ++L+ +  GH LGVVSV    +  IAAS+SLD+ +R++D++    + +++A P + W + F P    LA  G     V ++   +             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLAT-GTHMGKVNIFGVES-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          

HSP 2 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 55/224 (24.55%), Postives = 97/224 (43.30%), Query Frame = 3
Query:   39 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            +KS++ A     W + + P ++     L TG+    V ++  +  + E +       ++S+A  P G   AS ++D  + +FD+ T   + TLE     +  + F P  + L V       +K++D    NL  TLS                 +VL+VA+ PD       S D ++ V+DV     +H    H   V  + Y+    +++ S  DD  +H+YD
Sbjct:   99 MKSID-AGPVDAWTLAFSPDSQH----LATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLS-------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHVYD 302          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WDR61_MOUSE (WD repeat-containing protein 61 OS=Mus musculus GN=Wdr61 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.186e-37
Identity = 82/222 (36.94%), Postives = 133/222 (59.91%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLW--RPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            E AH++++W+V W    +     ++TGSLD+ VK+W  R + ++L+ +  GH LGVVSV    +  IAAS+SLD+ +R++D++    + +++A P + W + F P    LA  G     V ++   +             G K     +  KF+LS+A+SPDG+ +A G++DG I++FD+   K LH LEGH MP+RSL +SP D ++L +ASDD ++ +YD
Sbjct:   12 EQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLAT-GTHMGKVNIFGVES-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYD 218          

HSP 2 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 55/224 (24.55%), Postives = 97/224 (43.30%), Query Frame = 3
Query:   39 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            +KS++ A     W + + P ++     L TG+    V ++  +  + E +       ++S+A  P G   AS ++D  + +FD+ T   + TLE     +  + F P  + L V       +K++D    NL  TLS                 +VL+VA+ PD       S D ++ V+DV     +H    H   V  + Y+    +++ S  DD  +H+YD
Sbjct:   99 MKSID-AGPVDAWTLAFSPDSQ----YLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLS-------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHVYD 302          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: WSL17_SCHMA (WD repeat-containing protein SL1-17 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25
Identity = 72/222 (32.43%), Postives = 118/222 (53.15%), Query Frame = 3
Query:   51 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNT--GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            + AH+E +W  TW          ++TGSLD  +  W   + QL+      GH LGV+SV  + +G +AAS+SLDS + ++D++T     T +  P++ W + F P    LA  G  +  V + +  T     ++ +   EG          KFV  +A+  DG ++A G+++G +S+ D+     +  L+GH  PVRS+ +SP D R+L SASDD  + ++D
Sbjct:    9 KQAHKEGIWCCTWGENRNRNKQYIITGSLDNGLIAWEWTNSQLKCLYQFEGHRLGVISVDINSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTIAFSPDSRFLA-TGSHTGCVNMINVQTAQKEGSIQL---EG----------KFVYXLAYISDGSKLAAGTINGLVSICDLETGS-VQFLDGHATPVRSVSFSP-DGRLLASASDDKQIKVFD 214          
BLAST of FC921717 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 81/225 (36.00%), Postives = 116/225 (51.56%), Query Frame = 3
Query:   36 GLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            G +++E  H  SVW+V + P  E     + +GS D+T+K+W        +T  GH   V SVA  P G   AS S D  ++++D  +     TLE   S V  + F P G  +A +G G  ++K+WDTA+     TL     EG   +        V SVA+SPDG+R+A GS D TI ++D         LEGH   V+S+V+SP   RV  S SDD  + ++D
Sbjct:  875 GTQTLEG-HGGSVWSVAFSPDRER----VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIWDTASGTCTQTL-----EGHGGS--------VWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIWD 1079          

HSP 2 Score: 108.612 bits (270), Expect = 3.389e-23
Identity = 71/211 (33.65%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   60 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692
            H  SVW+V + P  +     + +GS D+T+K+W        +T  GH   V SV   P G   AS S D  ++++D  +     TLE     VW + F P G  +A +G    ++K+WD A+     TL                  +V SVA+SPDG+R+A GS+DGTI ++D         LEGH   V+S+ +SP   RV   +SD T
Sbjct: 1008 HGGSVWSVAFSPDGQR----VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIWDAASGTCTQTLE-------------GHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKT 1200          

HSP 3 Score: 102.834 bits (255), Expect = 1.859e-21
Identity = 69/218 (31.65%), Postives = 98/218 (44.95%), Query Frame = 3
Query:  126 TGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLS---------IPRPEGLKPTDKSSSKKF--------------------VLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692
            +GS D T+K+W        +T  GH   V+SVA  P G   AS S D  ++++D  +     TLE     VW + F P G  +A +G    ++K+WDTA+     TL          +  P+G +    S                         V SVA+SPDG+R+A GS+DGTI ++D         LEGH   V S+ +SP   RV   + D T
Sbjct:  942 SGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGT 1158          

HSP 4 Score: 95.1301 bits (235), Expect = 3.877e-19
Identity = 70/195 (35.90%), Postives = 97/195 (49.74%), Query Frame = 3
Query:  126 TGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 710
            +GS D+T+K+W        +T  GH   V SVA  P     AS S D  ++++D  +     TLE     V  + F P G  +A +G    ++K+WD A+     TL     EG       SS   VLSVA+SPDG+R+A GS D TI ++D         LEGH   V S+ +SP   RV  S SDD  + ++D
Sbjct:  858 SGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIWDAASGTCTQTL-----EG-----HGSS---VLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIWD 1037          

HSP 5 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 58/174 (33.33%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   60 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 581
            H +SVW+V + P  +     + +GS+D T+K+W        +T  GH   V SVA  P G   AS S+D  ++++D  +     TLE     V  + F P G  +A +G    ++K+WDTA+     TL                  +V SVA+SPDG+R+A GS D TI ++D
Sbjct: 1092 HGDSVWSVAFSPDGQR----VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGSSDKTIKIWDTASGTCTQTLE-------------GHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247          

HSP 6 Score: 84.7297 bits (208), Expect = 5.240e-16
Identity = 56/170 (32.94%), Postives = 78/170 (45.88%), Query Frame = 3
Query:  183 RTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 692
            +T  GH   V+SVA    G   AS S D  ++++D  +     TLE     VW + F P    +A +G    ++K+WD A+     TL                   V SVA+SPDG+R+A GS D TI ++D         LEGH   V S+ +SP   RV   + D T
Sbjct:  835 QTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVA-SGSDDKTIKIWDAASGTCTQTLE-------------GHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKT 990          
The following BLAST results are available for this feature:
BLAST of FC921717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
WDR61_XENTR1.369e-4039.64WD repeat-containing protein 61 OS=Xenopus tropica... [more]
WDR61_CHICK1.159e-3938.74WD repeat-containing protein 61 OS=Gallus gallus G... [more]
WDR61_DANRE1.514e-3938.29WD repeat-containing protein 61 OS=Danio rerio GN=... [more]
WDR61_XENLA1.977e-3939.19WD repeat-containing protein 61 OS=Xenopus laevis ... [more]
WDR61_BOVIN5.385e-3737.39WD repeat-containing protein 61 OS=Bos taurus GN=W... [more]
WDR61_HUMAN7.033e-3737.39WD repeat-containing protein 61 OS=Homo sapiens GN... [more]
WDR61_RAT9.186e-3736.94WD repeat-containing protein 61 OS=Rattus norvegic... [more]
WDR61_MOUSE9.186e-3736.94WD repeat-containing protein 61 OS=Mus musculus GN... [more]
WSL17_SCHMA2.123e-2532.43WD repeat-containing protein SL1-17 OS=Schistosoma... [more]
HETE1_PODAN4.003e-2436.00Vegetative incompatibility protein HET-E-1 OS=Podo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32108E06EF RVDevelopN Citrus clementina cDNA clone C32108E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921717 ID=FC921717; Name=FC921717; organism=Citrus clementina; type=EST; length=711bp
GAGGGTTGTGTCCACCAAACCAAATGAAATTTGCTGGTCTAAAATCAGTC
GAGAACGCGCACGAGGAGTCAGTATGGGCGGTCACGTGGGTACCGGCGAC
CGAGACTCGACCGGCGCTCTTGCTGACGGGATCGTTGGACGAGACCGTGA
AGCTGTGGCGGCCCGACGACATGCAGCTGGAGCGGACCAACACTGGCCAC
TGTTTGGGCGTAGTCTCTGTGGCAGCGCACCCGTCTGGTATTATAGCTGC
CTCTGCTTCTCTCGACAGCTTTGTTCGAGTATTTGATGTCGACACCAACG
CCTCTATTGCTACTCTCGAAGCTCCTCCTTCTGAAGTCTGGCAAATGCAG
TTCGATCCTAAGGGTACCACTCTAGCTGTTGCTGGAGGGGGTAGTGCATC
TGTAAAGCTCTGGGACACAGCCACTTGGAATCTGATTGCCACCCTGTCAA
TTCCTCGTCCAGAAGGACTGAAGCCGACAGATAAAAGTAGCAGCAAGAAG
TTTGTTCTATCAGTTGCATGGAGTCCTGATGGCAGACGAATTGCTTGTGG
TTCAATGGATGGCACAATTTCTGTTTTTGATGTTACCCGTGCCAAATTCC
TGCATCATCTGGAAGGCCATTTCATGCCTGTGCGTTCTCTTGTTTATTCC
CCTGTTGATCCACGTGTTCTCTTCTCTGCATCAGATGATACTCATGTGCA
CATGTATGATG
back to top