FC921727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921727 vs. ExPASy Swiss-Prot
Match: FBW2_ARATH (F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.373e-74 Identity = 137/199 (68.84%), Postives = 162/199 (81.41%), Query Frame = 2 Query: 137 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRC-QPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDFERCWDV 730 EVLTV+P VCK+W RAV GPYCWQEIDIE WSNR Q DHLDRM+EMLI RS+GSLRKL V+GL ND +FS IA++AGSL+TL++PRS +++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+ CWDV Sbjct: 29 EVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
BLAST of FC921727 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 65/200 (32.50%), Postives = 105/200 (52.50%), Query Frame = 2 Query: 137 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDFERCWDV 730 E+L VC+SWRR P W++ID+ + D+ L+ M + RS G L + + + + IA + +L++LRL R S+++D + +L + L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L++ + +S + IL +C+ LE LD RC++V Sbjct: 38 EILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNV 230
BLAST of FC921727 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 59/200 (29.50%), Postives = 103/200 (51.50%), Query Frame = 2 Query: 137 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDFERCWDV 730 E+L VCK W R P W++IDI+ ++R + L+ M + RS G L ++ + + + IA+ + +L++L L R ++D VA+ ++ + +L++SYC G +L IG+ C L L N P DD A AIA +MP+L+ L++ + ++ + + IL C LE LD +C+++ Sbjct: 200 EILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNI 398
BLAST of FC921727 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14 Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 2 Query: 161 VCKSWRRAVIGPYCWQEIDIEEWSNRC-QPDHL---------DRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMH----------PLDTADKLSQ--DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDFERC 721 V KSW PY W D+E W + + HL D M+ ++ S G L K+ V +D S A+ +LQ L + S ++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+ P + D Q D EA+AI M L+ LE+ + +S + + I C LE+LD C Sbjct: 35 VQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC 243
BLAST of FC921727 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 61/203 (30.05%), Postives = 95/203 (46.80%), Query Frame = 2 Query: 137 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLITR----SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLR-LPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDFERCWDV 730 E+L VCKSWRR P W++IDI N L ++E L R S G L ++ + L N + IA+ + +L+ L + + + V + A +L + LD++Y S I L+ +G+ C L L N T D D A AIA TMP L+ L++ + +S + IL C L+ L +C ++ Sbjct: 40 EILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNI 238 The following BLAST results are available for this feature:
BLAST of FC921727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921727 ID=FC921727; Name=FC921727; organism=Citrus clementina; type=EST; length=731bpback to top |