FC921728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_CAPAN (Phytoene synthase, chloroplastic OS=Capsicum annuum GN=PSY1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 7.254e-30 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L EAY+RC ++CAEYAK ER K IWA+Y WC+RTDELVDGPNA ++PAALDRWE+RL D+F+G P D+LDAAL+DTVSKF Sbjct: 129 LSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPAALDRWEDRLEDVFSGRPFDMLDAALSDTVSKF 219 HSP 2 Score: 21.9422 bits (45), Expect = 7.254e-30 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 675 IKPFRDMIKG 704 I+PFRDMI+G Sbjct: 223 IQPFRDMIEG 232
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY1_SOLLC (Phytoene synthase 1, chloroplastic OS=Solanum lycopersicum GN=PSY1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 2.715e-29 Identity = 69/163 (42.33%), Postives = 91/163 (55.83%), Query Frame = 1 Query: 193 INSAARSELNINIPREKNSIILPRLSTQGMLQSDVHICEIAERQS-LANNLSDKGDAFRSKPQL----DAMFLDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 IN + N S IL S + + S+ + ++ RQ+ L + KP + + L EAY+RC ++CAEYAK ER + IWA+Y WC+RTDELVDGPNA ++PAALDRWE RL D+FNG P D+LD AL+DTVS F Sbjct: 45 INRGGGKQTNNGRKFSVRSAILATPSGERTMTSEQMVYDVVLRQAALVKRQLRSTNELEVKPDIPIPGNLGLLSEAYDRCGEVCAEYAKTFNLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASYITPAALDRWENRLEDVFNGRPFDMLDGALSDTVSNF 207 HSP 2 Score: 21.9422 bits (45), Expect = 2.715e-29 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 675 IKPFRDMIKG 704 I+PFRDMI+G Sbjct: 211 IQPFRDMIEG 220
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY2_SOLLC (Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum GN=PSY2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.253e-28 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L EAY+RC ++CAEYAK +R + IWA+Y WC+RTDELVDGPNA ++P ALDRWE RL DIFNG P D+LDAAL+DTVS+F Sbjct: 13 LSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWEARLEDIFNGRPFDMLDAALSDTVSRF 103 HSP 2 Score: 21.557 bits (44), Expect = 2.253e-28 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 675 IKPFRDMIKG 704 I+PFRDM++G Sbjct: 107 IQPFRDMVEG 116
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_MAIZE (Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.946e-28 Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L EAY+RC +IC EYAK +ER + IWA+Y WC+RTDELVDGPNA ++P ALDRWE+RL D+F G P D+LDAAL+DT+S+F Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTALDRWEKRLEDLFTGRPYDMLDAALSDTISRF 205 HSP 2 Score: 22.3274 bits (46), Expect = 4.946e-28 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 669 LHIKPFRDMIKG 704 + I+PFRDMI+G Sbjct: 207 IDIQPFRDMIEG 218
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L+EAY+RC ++CAEYAK ER K IWA+Y WC+RTDELVDGPNA ++P ALDRWE RL ++F G P D+LDAAL DTV+KF Sbjct: 133 LNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKF 223
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 2.406e-27 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L EAY+RC ++CAEYAK ER K IWA+Y WC+RTDELVDGPNA ++P ALDRWE RL D+F G P D+LDAAL DTV+++ Sbjct: 128 LGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARY 218 HSP 2 Score: 21.9422 bits (45), Expect = 2.406e-27 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 675 IKPFRDMIKG 704 I+PFRDMI+G Sbjct: 222 IQPFRDMIEG 231
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L+EAY+RC ++CAEYAK ER + +WA+Y WC+RTDELVDGPNA ++P ALDRWE+RL D+F+G P D+ DAAL DTVS + Sbjct: 107 LNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTY 197
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26 Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 L +AY+RC ++CAEYAK ER + IWA+Y WC+RTDELVDG NA ++P+ALDRWE RL D+F G P D+ DAAL+DTVS+F Sbjct: 125 LKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDAALSDTVSRF 215
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: CRTB_SYNY3 (Phytoene synthase OS=Synechocystis sp. (strain PCC 6803) GN=crtB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.354e-20 Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 394 LDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 ++EAYE CR++ A+YAK + + IWA+Y WC+RTDELVDGP A +P LD WE RL IF G P D D AL DT+ F Sbjct: 45 VEEAYEICRQVTAQYAKTFYLGTLLMPPAKRRAIWAIYLWCRRTDELVDGPQAATTTPETLDHWERRLEGIFAGQPQDDADVALVDTLETF 135 HSP 2 Score: 22.3274 bits (46), Expect = 1.354e-20 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 669 LHIKPFRDMIKG 704 L I+PFRDMI G Sbjct: 137 LDIQPFRDMIAG 148
BLAST of FC921728 vs. ExPASy Swiss-Prot
Match: CRTB_SYNE7 (Phytoene synthase OS=Synechococcus elongatus (strain PCC 7942) GN=crtB PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.295e-20 Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 367 SKPQLDAMFLDEAYERCRKICAEYAKXXXXXXXXXXKERPKVIWAVYAWCKRTDELVDGPNAFCVSPAALDRWEERLXDIFNGHPNDILDAALTDTVSKF 666 ++P L EAYE CR+I A YAK + + + IWA+Y WC+RTDELVDGP A + A LD WE RL +F G P D D AL DT++++ Sbjct: 7 ARPSRALASLSEAYEECRQITARYAKTFYLGTLLMPEAKRQAIWAIYVWCRRTDELVDGPQAAQTNFATLDAWERRLERLFAGEPEDDCDVALVDTLARY 106 HSP 2 Score: 23.0978 bits (48), Expect = 2.295e-20 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 669 LHIKPFRDMIKG 704 L I+PFRDMI+G Sbjct: 108 LDIQPFRDMIEG 119 The following BLAST results are available for this feature:
BLAST of FC921728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921728 ID=FC921728; Name=FC921728; organism=Citrus clementina; type=EST; length=706bpback to top |