FC921747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52 Identity = 105/226 (46.46%), Postives = 144/226 (63.72%), Query Frame = -3 Query: 26 NSKGFDDYCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLK-RCFVAGDSAGGNLAHNVAVRANECNFSKLKLIGVIAIQPFFGGEERTESETRLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFYFFPELPEGSLLINDVKDFI 700 NS +D CRRL G AVV+SVNYR APE+RYPC Y+DG VLK++++ + D K R F+AGDS+GGN+ HNVAVRA E S++ ++G I + P FGG ERTESE RL G V++ DW W+AFLPEG +R HPA + FGP + + G++ P ++VVV G D +QDWQ ++ EGLKK G+E L+ GFY P +++++ F+ Sbjct: 121 NSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSS----SWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFV 339
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.206e-49 Identity = 97/227 (42.73%), Postives = 139/227 (61.23%), Query Frame = -3 Query: 20 NSKGFDDYCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECNFSKLKLIGVIAIQPFFGGEERTESETRLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFYFFPELPEGSLLINDVKDFIQN 700 NS +D +CRRL VV+SV+YR +PEHRYPC Y+DG + L ++ + + + + ++AGDS+GGN+AHNVAVRA +K++G I + P FGG+ERT+SE L G V+++ DW W+A+LPEG +R+HPA N FGP + GVN P ++VVV G D +QDWQ + +GLKK G E L+ GFYF P L+ ++ F+ + Sbjct: 123 NSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYV---YLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVHS 343
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48 Identity = 100/226 (44.25%), Postives = 135/226 (59.73%), Query Frame = -3 Query: 26 NSKGFDDYCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLK-RCFVAGDSAGGNLAHNVAVRANECNFSKLKLIGVIAIQPFFGGEERTESETRLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFYFFPELPEGSLLINDVKDFI 700 NS +D CRRL G VV+SVNYR APE+ YPC Y+DG L ++++ + D K F+AGDS+GGN+AHNVA+RA E S + ++G I + P FGG ERTESE L G V++ DW WKAFLPEG +R HPA N F P + GV+ P ++VVV G D ++DWQ + EGLKK G+E L+ GFY P +++++ F+ Sbjct: 123 NSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR----SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFV 341
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.864e-42 Identity = 89/221 (40.27%), Postives = 130/221 (58.82%), Query Frame = -3 Query: 26 FDDYCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECNFSKLKLIGVIAIQPFFGGEERTESETRLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFYFFPELPEGSLLINDVKDFI 688 +D CRR VV+SVNYR APEHRYPC Y+DG LK++ ++ A A R F++GDS+GGN+AH+VAVRA + +K+ G I + FGG ERTESE RL G V+++ DW WKA+LPE ++R+HPA N FGPN + G+ ++++V G D D Q + + L++ G +++ N GFY P ++ ++ DF+ Sbjct: 134 YDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQA---RVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFL 348
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: YR526_MIMIV (Putative alpha/beta hydrolase R526 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R526 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 53/222 (23.87%), Postives = 90/222 (40.54%), Query Frame = -3 Query: 35 YCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECNFSKLKLIGVIAIQPFFGGEERTESETRLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFYFFPELPEG-------SLLINDVK 679 + + + VI VNY LAPE ++P Q + D L + + + D V GDS GGN+A +A+ E + K I + P T+S P +S + +W ++ + N P+ + NA D S +P T++VV D L+D + + L G + T+H F L + +++N++K Sbjct: 126 FVSEIVNKANVTVIFVNYSLAPEKKFPTQIVECYDALVYFYSNAQRYN-----LDFNNIIVVGDSVGGNMATVLAMLTREKTGPRFKY--QILLYPVISAAMNTQSYQTFENGPWLSKKSMEWFYEQYTEPNQNLMIPSISPI--NATDRSIQYLPPTLLVVDENDVLRDEGEAYAHRLSNLGVPTKSVRVLGTIHDFMLLNPLVKSPATKLTLEIVVNEIK 338
BLAST of FC921747 vs. ExPASy Swiss-Prot
Match: YKN2_SCHPO (AB hydrolase superfamily protein B1A11.02 OS=Schizosaccharomyces pombe GN=SPAPB1A11.02 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 58/217 (26.73%), Postives = 97/217 (44.70%), Query Frame = -3 Query: 68 DDYCRRLAGEIPAVVISVNYRLAPEHRYPCQYEDGIDVLKFIDNEISKIEDFPACADLKRCFVAGDSAGGNLAHNVAVRANECNFSKLK--LIGVIAIQPFFGGEERTESET--------RLVGAPLVSMERTDWMWKAFLPEGSNRNHPATNAFGPNAVDISGVNIPATIVVVGGFDPLQDWQKRHYEGLKKCGKEAYLIEYPNTVHGFY-FFPEL 685 D + L + V +SV+YRLAPE ++P + D ID K++ + I K+ P + F+ G SAGGN V+V ++ K+K L G+ + P + ET + AP+++ + D ++ + P P + P ++P + G+DPL+D + + LK G E LI Y H F+ ++P L Sbjct: 110 DSLFKILTPKFGCVCVSVDYRLAPESKFPVAHNDAIDSFKWVASNIEKLGANPK----RGFFLGGASAGGNF---VSVLSHIARDEKIKPELTGLWHMVPTLIHPADLDEETMAQFRSYKETIHAPVITPKIMDIFFENYQPT------PKSPLVNPLYYPTGHKDLPPSFFQCCGWDPLRDEGIAYEKALKAAGNETRLIVYEGVPHCFWVYYPML 313 The following BLAST results are available for this feature:
BLAST of FC921747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921747 ID=FC921747; Name=FC921747; organism=Citrus clementina; type=EST; length=702bpback to top |