FC923156

Overview
NameFC923156
Unique NameFC923156
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11919 contig Ccv1_Contig11919:475..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.094e-26
Identity = 64/157 (40.76%), Postives = 104/157 (66.24%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF  P
Sbjct:   48 LLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMP 200          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.040e-26
Identity = 68/154 (44.16%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LPGAT+  + +++A++ +  +   AI GC GVFH+A+P      KDPE E++ P V+G ++++ A K+ G VRR+V TSS  ++  N    Q  V DE SWTD+DFC+  K+  W Y +SKTLAEKAA  +A ++G D+V I P   +GPF
Sbjct:   53 LMDLPGATE-RLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLS-KDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTV--NLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPF 202          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.892e-26
Identity = 63/157 (40.13%), Postives = 104/157 (66.24%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  +DPE E++ P + G L++L+A +K   VR++V TSS  ++  N    Q  V DE++W+D++FC+S K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF  P
Sbjct:   48 LLDLPKA-ETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFES-RDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMP 200          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.467e-25
Identity = 63/154 (40.91%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LPGA K  + +++A++ ++ + + AI GC GVFH+A+P   D  +DPE E++ P V+G L+++ A K+ G V+R+V TSS  S+  N         D+ +W+D+D+C+  K+  W Y +SK LAEKAA E+A +NG D ++I P   +GPF
Sbjct:   48 LLELPGA-KERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDS-QDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSV--NIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPF 197          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.834e-25
Identity = 63/156 (40.38%), Postives = 99/156 (63.46%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A K N+ +++A++ +  +   A++GC GVFH+A+P   +  KDPE E++ P + G L++L++  K  +RRVV TSS  ++  N    Q  V DET W+ LDF +S K+  W Y +SK LAE+AAW++A +N  + ++I P   +GPF  P
Sbjct:   65 LLDLPNA-KTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMP 216          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 9.952e-25
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LP A  L + +++A++ +  +   AI GC GVFH+A+P   +  KDPE E++ P V G L +++A  K   VRR V TSS  ++  N    Q  V DE  W+DL+F  S K+  W Y +SKTLAEKAAW+FAE+ G D ++I P   +GPF
Sbjct:   48 LLDLPNAKTL-LTLWKADLSEEGSYDDAINGCDGVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTV--NVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPF 197          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.782e-24
Identity = 61/154 (39.61%), Postives = 101/154 (65.58%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LP A + ++ +++A++ D  +   AI+GC GVFH+A+P   +  KDPE E++ P ++G L ++++ A    VRR+V TSS  ++  N    Q  V DE+ W+D++FC++ K+  W Y +SKTLAE+AAW++A++N  D + I P   +GPF
Sbjct:   48 LLDLPKA-ETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPF 197          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.939e-24
Identity = 62/157 (39.49%), Postives = 102/157 (64.97%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LPGA K  + +++A++ +  +   AI+GC GVFH+A+P   +  KDPE E++ P ++G L++++A  K   VRR++ TSS  ++  N    Q  + DE+ W+D++FC+  K+  W Y +SKTLAE+ AW+FA+++  DV+ I P   +GPF  P
Sbjct:   31 LLELPGA-KSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFES-KDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTL--NVTEDQKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIP 183          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.100e-23
Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A + N+ +++A++    +   AIEGC GVFH+A+P   +  KDPE E++ P ++G L+++ + AK   V+++V TSS  ++  N    Q  V DE+ W+DLDF  S K+  W Y +SKTLAEKAA E A++N  D V+I P   +GPF  P
Sbjct:   49 LLELPKA-ETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFES-KDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV--NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINP 201          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.132e-23
Identity = 61/154 (39.61%), Postives = 96/154 (62.34%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LP A + N+++++A++    +   AI+GC GVFHLA+P   +  KDPE E++ P ++G L+++ +  K   V+++V TSS  ++  N    Q  V DE+ W+DLDF  S K+  W Y +SKTLAEKAAW+  + N    ++I P   +GPF
Sbjct:   49 LLELPKA-QTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFES-KDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPF 198          
The following BLAST results are available for this feature:
BLAST of FC923156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DFRA_MALDO3.094e-2640.76Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MAIZE4.040e-2644.16Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_PYRCO6.892e-2640.13Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_HORVU4.467e-2540.91Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_DIACA5.834e-2540.38Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_ARATH9.952e-2543.51Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_VITVI3.782e-2439.61Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MEDSA4.939e-2439.49Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
DFRA_CALCH1.100e-2342.04Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_GERHY7.132e-2339.61Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701F11EF StrClemenN Citrus clementina cDNA clone C31701F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923156 ID=FC923156; Name=FC923156; organism=Citrus clementina; type=EST; length=532bp
CGTTGCTTGCTTTAACGGGGCTGACTCATAACAGCTTGGTCAGCCTCCCA
GGCGCCACCAAGCTCAACGTCCGTGTTTACGAGGCCAATATCTTAGACAA
CGAAGCAATTTCCAGGGCCATCGAGGGTTGCAAGGGGGTCTTCCATCTTG
CCTCTCCTAACACCCTGGATGATCCCAAGGACCCCGAAAAGGAGCTGCTC
ATTCCTGCTGTTCAAGGCACCCTCAATGTCTTAGAGGCTGCCAAGAAGTT
TGGTGTCAGGCGTGTGGTGCTCACCAGCTCCATTTCTTCCATTGTGCCTA
ATCCCAATTGGCCTCAAGGCAAGGTCATTGATGAAACTTCTTGGACCGAC
CTTGACTTTTGCAAGTCTCACAAGATATGGTATTCAATGTCAAAGACACT
AGCAGAAAAAGCAGCATGGGAATTTGCAGAGAAGAATGGAACGGATGTGG
TGGCAATCCATCCAGCCACATCTCTTGGGCCATTTCCGCAGCCTTACGTG
AACGCGAGCGGAGCTGTGCTGCAGCGTTTGTT
back to top