FC923194

Overview
NameFC923194
Unique NameFC923194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.174e-63
Identity = 119/210 (56.67%), Postives = 155/210 (73.81%), Query Frame = 2
Query:  113 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTIASIPNR-PHTGQNIRQHLKRHAP 718
            P+ KGLSW FY ++CPK+E+I+RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL GS S   EQ++ PNL+LR++A   +++LRA V K+CG+VVSC+DILALAARDSV LSGGP+Y +PLGRRDS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT    PN+ P   Q     LKR  P
Sbjct:   39 PIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCP 248          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52
Identity = 104/182 (57.14%), Postives = 137/182 (75.27%), Query Frame = 2
Query:  101 AQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 622
            A++PP+A GLS+ FY +SCPK ESIVR  +Q+A+++D+GLAAGL+R+HFHDCFVQGCD SVLL+GS +   EQ A PNL+LR  A K ++D+  R+HKEC G VVSC+D+LALAARDSV +SGGP+Y +PLGRRDS +FAT    +  LP P +    +L    +   +A + VALSGGHT+
Sbjct:   32 ARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42
Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 2
Query:  119 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 649
            ++GL   FY ++CP+LE IV+K + +A+ K   L A L+R+ FHDCFV+GCDGSVLL+   +  E++A PNLSLR      +DD +A + K C  +VSC+DILAL ARD++    GP++++  GRRD + +    VNLPSPF N T +++DFR K  N ++ V LSGGHT+G+ HCP  T
Sbjct:   23 SQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLR--GFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLT 200          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 87/181 (48.07%), Postives = 122/181 (67.40%), Query Frame = 2
Query:  119 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 646
            A+GLS T+Y  SCP  E IV+  + NAL+ D  LAAGLIR+ FHDCF++GCD S+LL+    +T+E+++  NLSLR    + +DD + ++   C  VVSCADI+A+AARD+V  +GGP YD+P GR D K        NLPSPF N + ++  F ++ F  ++ VALSG HT+G+A C +F
Sbjct:   23 ARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLR--GYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSF 201          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 83/185 (44.86%), Postives = 124/185 (67.03%), Query Frame = 2
Query:  110 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 649
            P   +GL   FYD++CPK E IV+K +  A+K D  +AA L+R+ FHDCFV+GC+GSVLLE      E+N+ PNL+LR    + +D+++A + KEC  +VSC+D+LAL ARD++    GP++++  GRRD   +     ++NLPSPF+N + ++  F+ K  + ++ V LSGGHT+G  HCP  T
Sbjct:   26 PTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLR--GFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQIT 208          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 86/171 (50.29%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFAT-VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 646
            +Y  SCPK ESIVR  +++    D  ++ GL+R+HFHDCFVQGCDGSVL++G ++EQ A PNL LR   L+ +DD +AR+   C  VVSCADILALAARDSV LS GP++ +P GR+D + + AT   NLPSP  +  V    F++K  +  + V L G HT+G   C  F
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSAEQAALPNLGLR--GLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASNLPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFF 201          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.383e-40
Identity = 83/175 (47.43%), Postives = 119/175 (68.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 646
            FY  SCP+ + IV   ++ A+ K+  +AA L+R+HFHDCFVQGCD S+LL+ S    SE+NA PN +  +   + +D+++A++ + C + VSCADILALAAR S  LSGGP+++LPLGRRDS+T +      N+P+P S    +L  F+ K  N  + V+LSGGHT+G+A C  F
Sbjct:   49 FYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVR-GFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTF 222          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 83/167 (49.70%), Postives = 110/167 (65.87%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 637
            FY   C  +ESIVR  +Q+ ++     A G++R+HFHDCFV GCDGSVLL G+TSE+ A PN SLR    + +++ +AR+ K C R VSCADIL LAARD+V L+GG  +++PLGR D + + A+ VNLP P  +      DF  KT N  + V L GGHT+G A C
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLR--GFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGC 205          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 649
            LS   Y +SCP L  IVRKQ+  ALK +I +AA LIR+HFHDCFV GCD S+LL+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D       +  NLPSPF     I+  F     N  + VALSG HT G A C  F+
Sbjct:   30 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEKLAIPNINSAR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFS 204          
BLAST of FC923194 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.017e-39
Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 2
Query:  113 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 649
            P+   L   FY  SCP  E IV+  + N +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL++R     F+D +++ +  +C  +VSCADI+ALA+RD+V  +GGPN+ +P GRRD   S     + N+P P SN T +   F  +  + ++ V LSG HT+G++HC +FT
Sbjct:   21 PIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVR--GFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFT 202          
The following BLAST results are available for this feature:
BLAST of FC923194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER12_ARATH1.174e-6356.67Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER1_SORBI1.218e-5257.14Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER27_ARATH1.143e-4248.33Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER47_ARATH1.949e-4248.07Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER56_ARATH5.672e-4244.86Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER25_ARATH6.271e-4150.29Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER9_ARATH2.383e-4047.43Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER69_ARATH1.545e-3949.70Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER59_ARATH1.545e-3950.00Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER3_ARATH2.017e-3943.48Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31702B01EF StrClemenN Citrus clementina cDNA clone C31702B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923194 ID=FC923194; Name=FC923194; organism=Citrus clementina; type=EST; length=723bp
GAAACCCAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAAC
TAGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAA
AATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTT
GTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTT
GTCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAA
CATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTG
ATCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGC
CCTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCA
TCGCCTCTATCCCAAACAGACCCCACACTGGACAAAACATTCGCCAACAT
CTCAAAAGACATGCCCCACTTCG
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