FC923196

Overview
NameFC923196
Unique NameFC923196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12575 contig Ccv1_Contig12575:748..1374. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: YEJF_SCHPO (C2 domain-containing protein C31G5.15 OS=Schizosaccharomyces pombe GN=SPAC31G5.15 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49
Identity = 100/207 (48.31%), Postives = 136/207 (65.70%), Query Frame = 1
Query:    1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            I  F+ FF   +N+ +V  P+  FKTFNEFF R+LKPG+RP    +  ++ V  ADSR++A++ +E +  +WIKG +F+++ LLG    +  F+ G++ I RLAPQDYHRFH PV+G I     I G  YTVNP+A+ S Y +VF EN RV+  I +  FGKV  VA+GA MVGS     + G  V++ DE GYF FGGSTVI +FE
Sbjct:  729 IKPFIRFF--DLNMNEVDMPVGGFKTFNEFFYRKLKPGSRPCAFPDNPDILVSPADSRIVAYECIEKATTYWIKGTEFTVERLLGYSNEAQRFVGGSICISRLAPQDYHRFHSPVNGCIGPITKIEGQYYTVNPMAIRS-YLDVFGENVRVLIPIDSNEFGKVMLVAVGAMMVGSTVLTVDEGKIVQRSDELGYFKFGGSTVITLFE 932          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_FUSNN (Phosphatidylserine decarboxylase proenzyme OS=Fusobacterium nucleatum subsp. nucleatum GN=psd PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.976e-42
Identity = 88/199 (44.22%), Postives = 128/199 (64.32%), Query Frame = 1
Query:   31 QINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEKD 627
            +I++++ K P+E + +FN+FF RELK GAR ID    E V V  AD +++A++++++  +F++KG KF+++    +   +  + +GT VI RLAP DYHRFH PV G I +   I G  Y+V+  A+ + +  +F ENKR  +I+ T  FG +A   IGATMVG I     T   VKKG+E GYF FGGST I VFEK+
Sbjct:   74 EIDMSEYKRPIEDYASFNDFFYRELKDGARKIDY--NENVIVSPADGKILAYQNIKEVDKFFVKGSKFTLEEFFNDKELAKKYEDGTFVIVRLAPADYHRFHFPVDGEISEIKKILGYYYSVSTHAIKTNF-RIFCENKREYAILKTEKFGDIAMFDIGATMVGGIVQTYKTNSSVKKGEEKGYFLFGGSTCILVFEKN 269          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CLONN (Phosphatidylserine decarboxylase proenzyme OS=Clostridium novyi (strain NT) GN=psd PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41
Identity = 93/209 (44.50%), Postives = 128/209 (61.24%), Query Frame = 1
Query:    7 KFVNFFKDQINLADVKYPLEH--FKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEKD 627
            K V+ F D  N+ + ++ L+   FK+FN+FF R+L   ARPI  +  E + +  AD RL A+++++      +KG  +S+  LL N   +  ++ GT ++FRLAP DYHRFH    GI E+ V I G  Y+VNPIA+  K   +F ENKR  SI  + HFG V +V +GAT VGSI       ++V KGDE GYF FGGST+I  FEKD
Sbjct:   60 KKVSKFIDDFNINEKEFTLKKSDFKSFNDFFYRKLNNDARPI--INDENILISPADGRLFAYENIDIHNLIQVKGLTYSLDELLKNIELAEKYIGGTCLLFRLAPVDYHRFHFIDDGICEEAVKISGSYYSVNPIAL-EKVPKLFCENKREYSIFHSKHFGDVLYVDVGATCVGSIIQTYTPNEYVVKGDEKGYFKFGGSTIILFFEKD 265          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLTR (Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis GN=psd PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 86/199 (43.22%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   25 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D   F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G L++++P+ +   +  VFTENKR ++II++  FG+VA+V +GA  VGSI    + G +VKKG E G+F+FGGSTV+ +F+
Sbjct:   72 KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGHLFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAYVEVGALNVGSIHQTFSPGSYVKKGAEKGFFAFGGSTVVLLFQ 267          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLTB (Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=psd PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 86/199 (43.22%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   25 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D   F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G L++++P+ +   +  VFTENKR ++II++  FG+VA+V +GA  VGSI    + G +VKKG E G+F+FGGSTV+ +F+
Sbjct:   72 KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGHLFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAYVEVGALNVGSIHQTFSPGSYVKKGAEKGFFAFGGSTVVLLFQ 267          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLTA (Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=psd PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 86/199 (43.22%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   25 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D   F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G L++++P+ +   +  VFTENKR ++II++  FG+VA+V +GA  VGSI    + G +VKKG E G+F+FGGSTV+ +F+
Sbjct:   72 KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGHLFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAYVEVGALNVGSIHQTFSPGSYVKKGAEKGFFAFGGSTVVLLFQ 267          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLT2 (Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=psd PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41
Identity = 86/199 (43.22%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   25 KDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            K +I + +   PL  + +FN+FF+R+LKP ARPI   + E++ V  AD   + F S+ D   F IK + FS++  LG+   ++ +  G+M I RLAP DYHRFH P++GI E    I G L++++P+ +   +  VFTENKR ++II++  FG+VA+V +GA  VGSI    + G +VKKG E G+F+FGGSTV+ +F+
Sbjct:   72 KYRICIEESASPLHDYASFNDFFVRKLKPDARPI--CQGEDICVTPADGAYLVFPSMADLSLFTIKNKPFSLESFLGDPQLAHQYAQGSMAIARLAPFDYHRFHFPIAGIAEAPRRINGHLFSIHPLMLKRNF-EVFTENKREITIITSKEFGEVAYVEVGALNVGSIHQTFSPGSYVKKGAEKGFFAFGGSTVVLLFQ 267          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD2_YEAST (Phosphatidylserine decarboxylase proenzyme 2 OS=Saccharomyces cerevisiae GN=PSD2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.772e-39
Identity = 89/184 (48.37%), Postives = 119/184 (64.67%), Query Frame = 1
Query:   70 FKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFL--NGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICV 615
            FKTFNEFF R+LKPG+R +     +E+    ADSR   F ++++S   W+KG+KFSI+ L  N+    +F   N ++ IFRLAPQDYHRFH P +G I + V + G  YTVNP+AV S+  +VF EN RV+  I +  FGK+ ++ IGA MVGSI       D V+ G E GYF FGGST+I +
Sbjct:  868 FKTFNEFFYRKLKPGSR-LPESNNKEILFSPADSRCTVFPTIQESKEIWVKGRKFSIKKL-ANNYNPETFNDNNCSIGIFRLAPQDYHRFHSPCNGTIGKPVYVDGEYYTVNPMAVRSEL-DVFGENIRVIIPIDSPQFGKLLYIPIGAMMVGSILLTCKENDVVESGQELGYFKFGGSTIIII 1048          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CLOBL (Phosphatidylserine decarboxylase proenzyme OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=psd PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.265e-37
Identity = 87/209 (41.63%), Postives = 128/209 (61.24%), Query Frame = 1
Query:    1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEKD 627
            I KF+N F+  ++L++ +  L +FK FN+FF R+LK  ARPI     + + +   D +L+A++++  +    +KG  +S   L+ ND  +  + NGT ++ RL P DYHRFH   +GI E  + + G  Y+VNPIA+ SK  +VF +NKR  SI  + +FG + F+ +GAT VGSI         V KGDE GYF FGGSTVI  F+K+
Sbjct:   62 INKFINDFQIDMSLSENQ--LSNFKCFNDFFTRKLKKEARPIKT--DKNLLISPGDGKLLAYENLNLNSVTEVKGINYSFYELINNDSLAKEYNNGTCLVLRLCPTDYHRFHFIDNGICENTIKLNGFYYSVNPIAL-SKIPSVFCKNKREYSIFHSENFGDIIFMEVGATCVGSIIQTYKPNTKVLKGDEKGYFKFGGSTVILFFKKN 265          
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLMU (Phosphatidylserine decarboxylase proenzyme OS=Chlamydia muridarum GN=psd PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.570e-37
Identity = 85/188 (45.21%), Postives = 116/188 (61.70%), Query Frame = 1
Query:   58 PLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621
            PL  F +FN+FFIR+LKP ARPI      E+ V  AD   + F S++D   F +K Q FS+  LL +   ++ +  G+M I RLAP DYHRFH PV GI      I G L++V+P+ +  +   VF ENKR +++I +  FGKV ++ IGA  VGSI      G +V KG E G+F+FGGSTV+ +FE
Sbjct:   83 PLCDFTSFNDFFIRKLKPEARPI--CGGSEICVTPADGAYLVFPSIKDVSLFSVKNQLFSLNSLLEDQQLASEYAEGSMAIARLAPFDYHRFHFPVEGIAGTPRLINGYLFSVHPLML-KRNLKVFAENKREITVIESKEFGKVVYIEIGALNVGSIHQTFAPGSYVGKGAEKGFFAFGGSTVVLLFE 267          
The following BLAST results are available for this feature:
BLAST of FC923196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
YEJF_SCHPO2.180e-4948.31C2 domain-containing protein C31G5.15 OS=Schizosac... [more]
PSD_FUSNN1.976e-4244.22Phosphatidylserine decarboxylase proenzyme OS=Fuso... [more]
PSD_CLONN3.727e-4144.50Phosphatidylserine decarboxylase proenzyme OS=Clos... [more]
PSD_CHLTR8.304e-4143.22Phosphatidylserine decarboxylase proenzyme OS=Chla... [more]
PSD_CHLTB8.304e-4143.22Phosphatidylserine decarboxylase proenzyme OS=Chla... [more]
PSD_CHLTA8.304e-4143.22Phosphatidylserine decarboxylase proenzyme OS=Chla... [more]
PSD_CHLT28.304e-4143.22Phosphatidylserine decarboxylase proenzyme OS=Chla... [more]
PSD2_YEAST7.772e-3948.37Phosphatidylserine decarboxylase proenzyme 2 OS=Sa... [more]
PSD_CLOBL3.265e-3741.63Phosphatidylserine decarboxylase proenzyme OS=Clos... [more]
PSD_CHLMU5.570e-3745.21Phosphatidylserine decarboxylase proenzyme OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionC31702B03EF StrClemenN Citrus clementina cDNA clone C31702B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923196 ID=FC923196; Name=FC923196; organism=Citrus clementina; type=EST; length=627bp
ATCCCAAAGTTTGTAAACTTCTTTAAGGATCAAATCAACTTGGCTGATGT
TAAGTACCCTTTGGAACATTTTAAGACATTTAATGAATTCTTCATTAGAG
AGTTAAAACCGGGTGCAAGACCAATTGATTGCATGGAACGTGAAGAGGTT
GCTGTATGTGCAGCTGATAGTCGTCTGATGGCTTTTAAATCGGTTGAAGA
CAGCCTTAGATTTTGGATCAAGGGTCAAAAGTTTTCAATTCAAGGTCTTT
TGGGAAATGACATATGTTCCAATTCTTTTTTAAATGGAACTATGGTGATT
TTTCGGTTGGCGCCACAGGATTATCATCGTTTTCATCTTCCGGTGTCGGG
AATCATTGAGCAATTTGTGGATATACCTGGATGCCTATACACTGTTAATC
CCATTGCTGTTAATAGCAAATATTGCAATGTTTTTACGGAGAACAAGCGT
GTTGTATCAATTATTTCGACTGCACATTTCGGAAAGGTAGCCTTTGTAGC
AATTGGTGCAACCATGGTTGGTAGCATCACTTTTCTGAAGAACACGGGTG
ACTTTGTCAAAAAAGGAGATGAGTTTGGATATTTCTCATTTGGTGGGAGC
ACAGTAATTTGTGTATTTGAAAAGGAT
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