FC923203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.508e-77 Identity = 142/205 (69.27%), Postives = 166/205 (80.98%), Query Frame = 3 Query: 126 MEITDKKESDINNTQTVADSVDNN---NKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMALRDSI-NGT*AAHSYVMEYSP 728 ME+ D+++ +I ++ + DS+ ++ + +EER++RELK HPL+ KF WYTRRTPGVR Q SYEDNIKK+V+FSTVEGFW CYCHLAR SLLPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWEDL+LALVGDQLD DNICGAVLS+RFNEDI+SVW +ASDHQAVM LRDSI H+YVMEY P Sbjct: 1 MEVLDRRDDEIRDSGNM-DSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQ-SYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKP 203
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.198e-44 Identity = 86/186 (46.24%), Postives = 123/186 (66.13%), Query Frame = 3 Query: 138 DKKESDINNTQTVADSVD---NNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMALRDSI 683 D +++ N+TQ + + N+ + +R+A HPL+ + FWY+RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+W ASD +RD++ Sbjct: 15 DHDQNEENSTQKDGEKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTL 200
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.091e-43 Identity = 85/186 (45.70%), Postives = 122/186 (65.59%), Query Frame = 3 Query: 138 DKKESDINNTQTVADSVDNNNKDAE---ERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMALRDSI 683 D +++ N+TQ + + ++ +R+A HPL+ + FWY+RRTPG T + SYE NIK+I F++VE FW Y H+ RP L +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE+L+LA++G+Q G+ ICGAV+S+RF EDI+S+W ASD +RD++ Sbjct: 15 DHDQNEENSTQKDGEKEKTDRDKSQSSGKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTL 200
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31 Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 246 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMALRDSI 683 H L+ + F Y R G Y ++ + +VE FW H RP+ + D+H FK G++P+WED ANC GGKWIIR KK +S R WE+L++A++G+Q GD +CGAV SIR EDI+S+W +A D +R+++ Sbjct: 31 HQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETL 176
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.165e-27 Identity = 58/143 (40.56%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 246 HPLKNKFVFWYTRRTPGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 HPL++ + FW+ P V++ QTS+ +++ + FSTVE FW Y ++ PS L D + FK I P WED NGGKW + F K S + W +LAL+G+Q D+GD ICGAV++IR ++ +S+W +AS+ A +++ Sbjct: 60 HPLEHSWTFWFDN--PAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSI 200
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 6.015e-26 Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 174 VADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 +AD D ++ A R HPL+N + FW+ G Q ++ I I FSTVE FW Y ++ PS L D H FK I P WED NGGKW I + S FW +LA++G+Q D+GD ICGAV+S+R ++ +++W +A++ A +++ Sbjct: 22 IADDGDGSSAAAAGR------ITAHPLENAWTFWFDN-PQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISI 180
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E_DROME (Eukaryotic translation initiation factor 4E OS=Drosophila melanogaster GN=eIF-4E PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25 Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 141 KKESDINNTQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWII---RFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVM----ALRDSI 683 K + D T A + A + R HPL N + WY S+ED +I F TVE FW Y H+ PS + +D LFK+ IRP+WED+AN GG+W+I + K W D++L L+G+ D+ D ICGAV++IR + +S+W ++ +A + LRD++ Sbjct: 46 KPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLEND----RSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDAL 229
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25 Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 204 DAEERQARELK-------------ANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 DA+ER+ E+ A HPL++ + FW+ G Q ++ +I+ I FSTVE FW Y ++ PS L D H FK I P WED NGGKW + S W +LA++G+Q DYGD ICGAV+S+R ++ +++W +A++ A +++ Sbjct: 25 DADEREEGEIADDDSGHAPPQANPAAPHPLEHAWTFWFDN-PQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISI 192
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 246 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 HPL++ + FW+ + Q ++ +I+ I FSTVE FW Y ++ PS L D H FK I P WED NGGKW I + S FW +LA++G+Q DYGD ICGAV+S+R ++ +++W +A++ A +++ Sbjct: 43 HPLEHSWTFWFDNPQSKSK-QAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDPICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQVSI 183
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E_DICDI (Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 67/187 (35.83%), Postives = 98/187 (52.41%), Query Frame = 3 Query: 132 ITDKKESDINNTQTV-ADSVDNNNKDA-------EERQARELKANL--HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK-KVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWKPHASDHQA 659 +T + + NNTQ ++ DN NK+ EE+Q E NL HPL+N++ WY ++ + + + D++KK++ F +VE FW + +L S L + HLFK+ I P WE +N GGKW + K K W V+A VG+ D D ICG V + R N D +SVW A D +A Sbjct: 26 VTSETTTTTNNTQNKETETTDNINKEETADKENKEEQQQEENPENLIKHPLQNRWSLWYDYQSGKINPE-HWVDSLKKVISFDSVEDFWCVFNNLPNVSNLKQGSSYHLFKDDIEPKWEHESNKRGGKWFVMVKDKSRCDNQWLQSVMACVGETFDSSDEICGIVYNSRKNGDKISVWTKTAQDEKA 211 The following BLAST results are available for this feature:
BLAST of FC923203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923203 ID=FC923203; Name=FC923203; organism=Citrus clementina; type=EST; length=743bpback to top |