FC923214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923214 vs. ExPASy Swiss-Prot
Match: NCLN_RAT (Nicalin OS=Rattus norvegicus GN=Ncln PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25 Identity = 78/249 (31.33%), Postives = 122/249 (49.00%), Query Frame = 3 Query: 3 FGAAPALXXXXXXXXXXXXALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPHNYNGTHKWLR-SFDQR----LRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGF---KVGLKHKKINISNPRVAWEHEQFSRLRVXXXXXXXXXXXXXXXXXXGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGK----NIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISK 713 FG AP L LLE+ARLFS LY+ +T YN+LF + GG NY GT +WL S D L++++ + +CL++VG + L +HVSKPP ++ +F + F + HKKIN+++ +AWEHE+F+ R+ ++D R VD + R+ +++AE+L R IY K ++ +F + + V I S +D L+ PR A + K Sbjct: 228 FGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASGGGKFNYQGTKRWLEDSLDHTDSSLLQDNVAFVLCLDTVGR-GSHLRLHVSKPPREGTLQHVFLRELEMVAAHQFPDVSFSMVHKKINLADDVLAWEHERFAIRRL--PAFTLSHLENHRAGPRSSIMDVRSRVDSKTLTRNTRIIAEALTRVIYNLTEKGTPPDMPVFTE--QMQVQQEQIDSVMDWLTNQPRAAQLLDK 471
BLAST of FC923214 vs. ExPASy Swiss-Prot
Match: NCLN_MOUSE (Nicalin OS=Mus musculus GN=Ncln PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25 Identity = 78/251 (31.08%), Postives = 128/251 (51.00%), Query Frame = 3 Query: 3 FGAAPALXXXXXXXXXXXXALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPHNYNGTHKWLR-SFDQR----LRESIDYAICLNSVGSWNNELWIHVSKPP-----ENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVXXXXXXXXXXXXXXXXXXGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGK----NIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISK 713 FG AP L LLE+ARLFS LY+ +T YN+LF + GG NY GT +WL S D L++++ + +CL++VG + L +HVSKPP ++A+++++ + ++ F + HKKIN+++ +AWEHE+F+ R+ ++D R VD + R+ +++AE+L R IY K ++ +F + + V I S +D L+ PR A + K Sbjct: 228 FGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASGGGKFNYQGTKRWLEDSLDHTDSSLLQDNVAFVLCLDTVGR-GSHLRLHVSKPPREGTLQHAFLRELETVAAHQFPDVSF--SMVHKKINLADDVLAWEHERFAIRRL--PAFTLSHLESHRAGPRSSIMDVRSRVDSKTLTRNTRIIAEALTRVIYNLTEKGTPPDMPVFTE--QMQVQEEQIDSVMDWLTNQPRAAQLLDK 471
BLAST of FC923214 vs. ExPASy Swiss-Prot
Match: NCLN_HUMAN (Nicalin OS=Homo sapiens GN=NCLN PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24 Identity = 74/251 (29.48%), Postives = 126/251 (50.20%), Query Frame = 3 Query: 3 FGAAPALXXXXXXXXXXXXALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPHNYNGTHKWL-----RSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPP-----ENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVXXXXXXXXXXXXXXXXXXGGLLDSRHFVDETSFIRSVKLVAESLARHIYGYQGK----NIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISK 713 FG AP L LLE+ARLFS LY+ +T YN+LF + GG NY GT +WL + L++++ + +CL++VG + L +HVSKPP ++A+++++ + E+ F + HK+IN++ +AWEHE+F+ R+ ++D R VD + R+ +++AE+L R IY K ++ +F + + + + S +D L+ PR A + K Sbjct: 228 FGVAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTVGR-GSSLHLHVSKPPREGTLQHAFLRELETVAAHQFPEVRF--SMVHKRINLAEDVLAWEHERFAIRRL--PAFTLSHLESHRDGQRSSIMDVRSRVDSKTLTRNTRIIAEALTRVIYNLTEKGTPPDMPVFTE--QMQIQQEQLDSVMDWLTNQPRAAQLVDK 471
BLAST of FC923214 vs. ExPASy Swiss-Prot
Match: NCLN_DANRE (Nicalin-1 OS=Danio rerio GN=ncl1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.402e-23 Identity = 84/264 (31.82%), Postives = 128/264 (48.48%), Query Frame = 3 Query: 3 FGAAPALXXXXXXXXXXXXALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPHNYNGTHKWLR-SFDQR----LRESIDYAICLNSVGSWNNELWIHVSKPPE--NAYIKQIFEGFTNVA-EELGFKVGLKHKKINISNPRVAWEHEQFSRLRVXXXXXXXXXXXXXXXXXXGGLLDSRH---------------FVDETSFIRSVKLVAESLARHIYGYQGK----NIQIFADNSSLAVNPSYIRSWLDLLSQTPRVAPFISK 713 FG AP L LLE+ARLFS LYS +T YN+LF L+ GG NY GT +WL + D L++++ + +CL+++G+ +N L +HVSKPP+ + + E T VA + K + HKKIN+++ +AWEHE+F R+ ++D R VD R+ K++AE+LAR IY K +++IF + + V + S +D L+ PR A + K Sbjct: 221 FGVAPWLSYGADSNGSGVAILLELARLFSRLYSYKRTHAGYNLLFFLSGGGKFNYQGTKRWLEDNLDHTDASLLQDNVAFVLCLDTLGNSDN-LHLHVSKPPKEGSPQYTLLKELETVVAHQHPDLKFAMVHKKINLADDTLAWEHERFGIRRLPAFTLSHLESHRSPARH--SIMDMRSVSPSLEGAGEATTGPHVDLGKLSRNTKVIAETLARVIYNLTEKGVTGDLEIFTE--QMQVQEDQLASLVDWLTAQPRAAQLLDK 479
BLAST of FC923214 vs. ExPASy Swiss-Prot
Match: NCLN_CHICK (Nicalin OS=Gallus gallus GN=NCLN PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 3 FGAAPALXXXXXXXXXXXXALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPHNYNGTHKWL-----RSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGF---KVGLKHKKINISNPRVAWEHEQFSRLRV 440 FG AP L LLE+ARLFS LY+ +T YN+LF + GG NY GT +WL + L++++ + +CL+++G N L +HVSKPP+ ++ F + F K + HKKIN++ +AWEHE+F+ R+ Sbjct: 227 FGVAPWLSHGADSNGSGVSVLLELARLFSRLYTYRRTHAGYNLLFFASGGGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTLGR-GNSLHLHVSKPPKEGTLQHAFLRELEMVVASQFPEVKFSMVHKKINLAEDILAWEHERFAIRRL 379 The following BLAST results are available for this feature:
BLAST of FC923214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923214 ID=FC923214; Name=FC923214; organism=Citrus clementina; type=EST; length=718bpback to top |