FC923216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_DANRE (UPF0428 protein CXorf56 homolog OS=Danio rerio GN=zgc:103697 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D Q++K+P R DKA V+D KH + N++E V L+R EG +E+Q+R C CGL + Y+ + ++ ++VDGAL Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQIEKLPMRPRDKARVIDAAKHAHKFCNVEEDEAVYLKRSEG-IERQYRKKCGKCGLLLFYQHQ--MKSTQTTFIVDGAL 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_XENTR (UPF0428 protein CXorf56 homolog OS=Xenopus tropicalis GN=TNeu084h20.1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R DKA V+D KH + N +E V LRR +G +E+Q+R C C L + Y+ + A+F +V+GAL Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDKARVIDAAKHAHKFCNTEEEEPVYLRRPDG-IERQYRKKCSKCSLLLFYQHSQKNVAATF--IVNGAL 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_BOVIN (UPF0428 protein CXorf56 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R D++ V+D KH + N ++ + LRR EG +E+Q+R C CGL + Y+S+ + A ++VDGA+ Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDRSRVIDGAKHAHKFCNTEDEETIYLRRPEG-IERQYRKKCAKCGLPLFYQSQP--KNAPVTFIVDGAV 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_HUMAN (UPF0428 protein CXorf56 OS=Homo sapiens GN=CXorf56 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R D++ V+D KH + N ++ + LRR EG +E+Q+R C CGL + Y+S+ + A ++VDGA+ Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG-IERQYRKKCAKCGLPLFYQSQP--KNAPVTFIVDGAV 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_MOUSE (UPF0428 protein CXorf56 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R D++ V+D KH + N ++ LRR EG +E+Q+R C CGL + Y+S+ + A ++VDGA+ Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETTYLRRPEG-IERQYRKKCAKCGLPLFYQSQP--KNAPVTFIVDGAV 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_XENLA (UPF0428 protein CXorf56 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R D+A V+ KH + N +E V LRR +G +E+Q+R C C L + Y+ + A+F +V+GAL Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDRARVIGAAKHAHKFCNTEEEEPVYLRRSDG-IERQYRKKCSKCSLLLFYQHSQKNAAATF--IVNGAL 119
BLAST of FC923216 vs. ExPASy Swiss-Prot
Match: CX056_PONAB (UPF0428 protein CXorf56 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 98 DGPDSDLFVYYCKHCGSHVLITDTQLQKMPKRKTDKAYVLDKTKHLARL-NIKEAGKVLLRRGEGKLEKQFRMNCIGCGLFVCYRSEETLEVASFVYVVDGAL 403 D + L VYYC CG VL+ D QL+K+P R D++ V+D KH + N ++ + LRR EG +E+Q+ C CGL + Y+S+ + A ++VDGA+ Sbjct: 21 DDGEKPLHVYYCL-CGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEG-IERQYGKKCAKCGLPLFYQSQP--KNAPVTFIVDGAV 119 The following BLAST results are available for this feature:
BLAST of FC923216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923216 ID=FC923216; Name=FC923216; organism=Citrus clementina; type=EST; length=702bpback to top |