FC923223

Overview
NameFC923223
Unique NameFC923223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14414 contig Ccv1_Contig14414:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.739e-46
Identity = 90/207 (43.48%), Postives = 133/207 (64.25%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPILALESARFTGENHEEVDRVPRVYIKTMHDRV 648
            HFV VHG S GAWCWYK+  L+  +G+K + ++L GAG + +D+N++  FD YN+PL   +S L  + K++LVGHS GG S+T+A  KF +KI + VYLAA M++ G  +     I    ++   +D+++  +G GAD+PPT  ++K+E +R   Y  SP ED +LA+ L+RP P+ AL  A     N  E ++VPRVYIKT  D +
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADMVQPGSTSSTHDSI----MTVGEEDIWEYIYGEGADKPPTGVLMKEEFRRHYYYSQSPLEDVSLASKLLRPAPVRALGGADKLSPN-PEAEKVPRVYIKTAKDNL 214          

HSP 2 Score: 24.6386 bits (52), Expect = 7.739e-46
Identity = 7/15 (46.67%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  665 DAMIXEWPPSEVYAL 709
            D ++ +WPPS++Y L
Sbjct:  221 DRLVEKWPPSQLYIL 235          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.545e-43
Identity = 91/210 (43.33%), Postives = 128/210 (60.95%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIGVPDLSGF---GDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPILALESARFTGENHEEVDRVPRVYIKTMHDRV 648
            HFV VHG S GAWCWYK+  L++ +G+K + ++L GAG    D+N +   D YN+PL   +S L  + KVILVGHS GG S+T+A  KF +KI +A+YLAA+M++ G        I  P LS      +D+++  +G G D+PPT  ++K E  R   Y  SP ED TL++ L+RP P+ A +       N  E ++VPRVYIKT  D +
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPG-------SIPSPHLSNIHVGEEDIWEYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDVTLSSKLLRPAPMRAFQDLDKLPPN-PEAEKVPRVYIKTAKDNL 213          

HSP 2 Score: 24.6386 bits (52), Expect = 1.545e-43
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  665 DAMIXEWPPSEVYAL 709
            D ++  WPPS++Y L
Sbjct:  220 DLLVENWPPSQLYVL 234          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31
Identity = 73/209 (34.93%), Postives = 118/209 (56.46%), Query Frame = 1
Query:   31 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPI-LALESARFTGENHEEVDRVPRVYIKTMHDRVVN 654
            FVLVHG   GAWCWYK+   +E SG     ++L G G + +D N++ + ++Y+KPL+D + +L + EKVILVGHS GG SI+ A  +F  KI  A+++ ATM+  G    +     +     F  +   L +G G D+PPT  + ++   + + +  SP +D  LA + +RP P+   +E    T E +    +  R Y++T+ DR ++
Sbjct:   98 FVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRPFDVFSEELGSAERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGLYFNQSPNKDIALAMISMRPVPLGPMMEKVSLTAERY---GKGRRFYVQTLDDRALS 303          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29
Identity = 74/215 (34.42%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM----LKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPG------PILALESARFTGENHEEVDRVPRVYIKTMHD 642
            HFV VHG+  GAWCWY+V   +  +G++ + +++  AG  P+ A+ + S ++Y++PL+D +++    E+++LVGHS GGLS+  A  +F +K+  AV+LAA M      +G   +E ++   PD   F  D   +       +P T+ ++  +L  + +Y  SP ED TLA MLVRPG      PI+  E+    G        V RV++  M D
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRIKPD---FFMDSKTIVLNTN-QEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEG----NYGSVKRVFLVAMDD 213          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29
Identity = 74/215 (34.42%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM----LKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPG------PILALESARFTGENHEEVDRVPRVYIKTMHD 642
            HFV VHG+  GAWCWY+V   +  +G++ + +++  AG  P+ A+ + S ++Y++PL+D +++    E+++LVGHS GGLS+  A  +F +K+  AV+LAA M      +G   +E ++   PD   F  D   +       +P T+ ++  +L  + +Y  SP ED TLA MLVRPG      PI+  E+    G        V RV++  M D
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRIKPD---FFMDSKTIVLNTN-QEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEG----NYGSVKRVFLVAMDD 213          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27
Identity = 74/215 (34.42%), Postives = 116/215 (53.95%), Query Frame = 1
Query:   19 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIGVP----DLSGFGDDVYQLGFGL--GADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPILALESARFTGENHEEVDRVPRVYIKTMHDR 645
            Q+ HFVLVHG   GAW WYK++ L+E++G+KV+ ++L  AG +P   + IH+F DY++PLM+ M+S+  +EKV+L+GHS GG+S+  A   +  KI +AV+++A M       D +  +  P    +     D +    F      + P  S I+  +     ++Q    ED  LA ML RPG +   + A+    + E    V R YI    D+
Sbjct:    9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMM------PDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDK 217          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 70/212 (33.02%), Postives = 117/212 (55.19%), Query Frame = 1
Query:   22 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFM-SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM----LKLGFCTDEDVKIGVPDLSGFGDDVYQL----GFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPG------PILALESARFTGENHEEVDRV 612
            K HF+LVHG+  GAWCWY+V   +  +G++ + +++  +G  P+  + + +F++Y++PL+D + ++    E+++LVGHS GGLS+  A  +F +K+  AV++AA M      +G  T+E ++   P+      ++  +    G G+  +  PT    K        YQ SP ED  LA MLVRPG      P++  ES   T  N+  V +V
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEGLLMDCEMVAINNSQGSGVAINLGPTFLAQK-------YYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESL-LTNGNYGSVKKV 211          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 70/212 (33.02%), Postives = 117/212 (55.19%), Query Frame = 1
Query:   22 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFM-SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM----LKLGFCTDEDVKIGVPDLSGFGDDVYQL----GFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPG------PILALESARFTGENHEEVDRV 612
            K HF+LVHG+  GAWCWY+V   +  +G++ + +++  +G  P+  + + +F++Y++PL+D + ++    E+++LVGHS GGLS+  A  +F +K+  AV++AA M      +G  T+E ++   P+      ++  +    G G+  +  PT    K        YQ SP ED  LA MLVRPG      P++  ES   T  N+  V +V
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEGLLMDCEMVAINNSQGSGVAINLGPTFLAQK-------YYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESL-LTNGNYGSVKKV 211          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 69/208 (33.17%), Postives = 106/208 (50.96%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGAD-QPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPILALESARFTGENHEEVDRVPRVYIKTMHDRV 648
            HFVL+H I  GAW W+K++ L+E  G+KV+ ++L  +G DP     I SFD+Y++PL+ F+ +L   EKVILVG S GGL+I  A+ K+  KI  AV+  + +     C    V   +     + D  Y   F    D +  T   +   L R+ +Y +   E+  LA ML R G +     A+      E    + ++Y+ T  D +
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTY---FTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEI 209          
BLAST of FC923223 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 62/210 (29.52%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   28 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLEGAGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY---LAATMLKLGFCTDEDVKIGVPDLSGFGDDVYQLGFGLGADQPPTSAIVKQELQRKIIYQMSPQEDSTLAAMLVRPGPILALESARFTGENHEEVDRVPRVYIKTMHDRV 648
            HFVL+H I  GAW W+K++  +E +G+KV+ +++  +G DP     I+SFD+Y++PL+ F+  L   EKVI+VG S  GL+I  A+ ++ +KI   V+   L    +     T E +    PD      D     F     +  T+  +   L R+ ++      +  LA M++R G +     A+      +    + +VYI T  D++
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESFPDWR----DTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKI 210          
The following BLAST results are available for this feature:
BLAST of FC923223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PPD_RAPSA7.739e-4643.48Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH1.545e-4343.33Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
Y1399_ARATH2.589e-3134.93Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PIR7A_ORYSJ9.207e-2934.42Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI9.207e-2934.42Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
PNAE_RAUSE2.268e-2734.42Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7B_ORYSJ5.586e-2633.02Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI5.586e-2633.02Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
HNL_HEVBR1.521e-2333.17Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES3.507e-2029.52Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31702D06EF StrClemenN Citrus clementina cDNA clone C31702D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923223 ID=FC923223; Name=FC923223; organism=Citrus clementina; type=EST; length=709bp
TAAAAACCAGCTGAAGTACAGAAGCCACACTTTGTGCTGGTGCATGGCAT
AAGTGGAGGAGCATGGTGCTGGTACAAAGTCAGATGCCTCATGGAGAATT
CAGGCTACAAAGTTTCATGCATCAATCTCGAAGGTGCTGGAACTGATCCA
TCCGATGCAAATTCTATTCATTCTTTTGATGATTATAACAAACCTCTCAT
GGACTTCATGTCTTCTTTGACTGATAATGAAAAGGTGATATTGGTGGGGC
ACAGTGCTGGAGGCTTAAGCATAACTCAGGCCAGTCACAAATTTGGTAAC
AAAATCCGGCTGGCGGTTTATTTGGCAGCCACGATGCTGAAACTGGGGTT
CTGCACAGATGAAGATGTTAAAATTGGGGTACCTGACTTATCGGGATTCG
GCGACGACGTGTACCAATTAGGATTTGGATTAGGAGCTGATCAACCTCCA
ACCAGCGCCATTGTCAAGCAAGAATTGCAGCGCAAAATCATCTATCAAAT
GAGTCCTCAAGAGGATTCAACACTAGCTGCCATGCTTGTAAGGCCAGGAC
CGATCCTGGCATTAGAGTCAGCCCGGTTCACAGGAGAGAATCATGAGGAA
GTGGACAGGGTGCCGCGTGTTTACATCAAGACCATGCATGATCGTGTTGT
CAACCAGAGCAACAGATGCCATGATAAANGAGTGGCCGCCGTCTGAAGTA
TATGCTTTG
back to top