FC923237

Overview
NameFC923237
Unique NameFC923237
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14419 contig Ccv1_Contig14419:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.157e-47
Identity = 94/205 (45.85%), Postives = 133/205 (64.88%), Query Frame = 3
Query:   81 MEAKATVIGNSLVEPSILELANNLPLTTVPPRYVRPEIDHPLIRNDDSSAQQLPVIDMHTLLSGD--DSELEKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFWQQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPNDMTELFE 689
            MEAK     +S++ PS+ E+     +TTVPPRYVR + D   + +D     ++P+IDM  L S    DSE+EKLD ACKEWGFFQL+NHG+ SS ++KVK+EIQ+FFNLP++EKKKFWQ+P +IEGFGQ F+ SE+QKLDW   F     P                 D LE+Y +E++++   ++  MA+AL + P ++ +LF+
Sbjct:    1 MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFD 205          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 3
Query:   81 MEAKATVIGNSLVEPSILELANNLPLTTVPPRYVRPEIDHPLIRNDDSSAQQLPVIDMHTLLSGDDS--ELEKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFWQQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPNDMTELFET 692
            M    T +G SL   ++  LA    L  +P RYVRPE++H  +   D+S + +PVID+  LL    +  EL K   AC +WGFFQL+NHGV   ++EK+K + ++FF LP  EK  + Q P  +EG+GQ F+TSEEQKLDW     + T P                 + +E Y  EL+ + + +  +MAK L ++   +T+   T
Sbjct:    1 MSKNLTGVGGSLPVENVQVLAGK-ELKNLPNRYVRPELEHDDVVPIDNSLE-IPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT 204          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 57/192 (29.69%), Postives = 90/192 (46.88%), Query Frame = 3
Query:  123 PSILELANNLPLTTVPPRYVRPE------IDHPLIRNDDSSAQQLPVIDMHTLLSGDDSELEK----LDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFW--QQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMD 662
            P + ELA +  L T+P  YVRPE      I + L     S   QLP ID+  + S D+   +K    L  A  +WG   L+NHG+   L+++VKA  +EFF LP++EK+ +   Q  G+++G+G     +   +L+W   F     P                      Y  +L+ L  KIL +++  L ++
Sbjct:   10 PRVEELARS-GLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLE 200          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 48/180 (26.67%), Postives = 86/180 (47.78%), Query Frame = 3
Query:  156 LTTVPPRYVRPE-----IDHPLIRNDDSSAQQLPVIDMHTLLSGDDSEL----EKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFW--QQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMD 662
            ++T+P  Y+RP+     I     +  ++   Q+P ID+  + S ++       EKL  A  +WG   L+NHG+S  L++KV+   + FF+LPI++K+K+   Q  G I+G+G     +   +L+W   F     P                 +    Y  +L+ L  K+L +++  L +D
Sbjct:   19 ISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLD 198          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 3
Query:  117 VEPSILELANNLPLTTVPPRYVRPEIDHPLIRN-----DDSSAQQLPVIDMHTLLSGDD---SEL-----EKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFW--QQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMD 662
            V P +  L+++  + ++P  Y+RP+ +   I N           Q+P ID+  + S D+    E+     E+L  A  EWG   L+NHG+S  L+ +VK   + FFNLP++EK+K+   Q  G I G+G     +   +L+W   F     P                      Y  +L++L  KIL +++  L ++
Sbjct:    5 VAPRVESLSSS-GIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLE 200          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 47/174 (27.01%), Postives = 86/174 (49.43%), Query Frame = 3
Query:  177 YVRPEIDHPLIRNDDSSAQQLPVIDMHTLLSGDDSE------LEKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFWQQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPNDMTE 680
            +VR E + P +  +  S  ++P+I +  L   DDS+        K+  AC++WG FQ+++HG+ S L+ ++    +EFF LP +EK ++    G   GF    +   +  +DW    T F+ P                    EVY  +L  L  K+L+++++A+ ++  D+T+
Sbjct:   19 FVRDEDERPKVAYNQFS-NEIPIISLAGL--DDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTK 189          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 46/182 (25.27%), Postives = 84/182 (46.15%), Query Frame = 3
Query:  156 LTTVPPRYVRPE-----IDHPLIRNDDSSAQQLPVIDMHTLLSGDDSE----LEKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFW--QQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPN 668
            + ++P  Y+RP+     I+   +        Q+P ID+  + S D+      +E+L  A  +WG   L+NHG+ + L+E+VK   +EFF+L ++EK+K+   Q  G I+G+G     +   +L+W   F     P                 +    Y   L+ L  K+   ++  L ++P+
Sbjct:   15 IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD 196          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 51/186 (27.42%), Postives = 89/186 (47.85%), Query Frame = 3
Query:  162 TVPPRYVRPEIDHPLIRNDDSSAQQLPVIDMHTL--LSGDDSEL-EKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFWQQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPNDMTELFETGCIVKD 710
            T+  ++VR E + P +  +D S  ++P+I +  +  + G   E+ +K+  AC++WG FQ+++HGV + L+ ++    +EFF LP +EK +F    G   GF        E   DW    T F+ P                 +  + Y  EL  L  K+L ++++A+ +D    TE     C+  D
Sbjct:   15 TLQQKFVRDEDERPKVAYNDFS-NEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLD----TEALTKACVDMD 195          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 52/190 (27.37%), Postives = 84/190 (44.21%), Query Frame = 3
Query:  123 PSILELANNLPLTTVPPRYVRPEIDHPLIRN-----DDSSAQQLPVIDMHTLLSGDDSELEK---LDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFW--QQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMD 662
            PS +E      +  +P  YVRP+ +   I N           Q+P ID+  + S D    EK   L  A  EWG   L+NHG+S  L+ +VK   + FF+ P++EK+K+   Q  G+++G+G     S   +L+W   F     P                      Y  +++ L  KIL +++  L ++
Sbjct:    9 PSRVESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLE 198          
BLAST of FC923237 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 49/176 (27.84%), Postives = 83/176 (47.16%), Query Frame = 3
Query:  162 TVPPRYVRPEIDHPLIRNDDSSAQQLPVIDMHT----LLSGDDSELEKLDHACKEWGFFQLMNHGVSSSLVEKVKAEIQEFFNLPIDEKKKFWQQPGDIEGFGQLFITSEEQKLDWGYGFTMFTLPTXXXXXXXXXXXXXXXXDDLEVYLTELKNLTLKILDLMAKALRMDPNDMT 677
            T+   +VR E + P +  +D S  ++PVI +      L +  D    K+  AC++WG FQ++NHGV S+L+ ++    +EFF LP +E  +F    G   GF        E   DW    T F+ P                    + Y  +L  L  K+L+++++A+ +D + +T
Sbjct:   14 TLQSSFVRDEDERPKVAYNDFS-NEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALT 188          
The following BLAST results are available for this feature:
BLAST of FC923237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
SRG1_ARATH1.157e-4745.85Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA4.416e-3136.89S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_PERFR1.801e-1629.69Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_MALDO2.202e-1426.67Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_VITVI8.366e-1427.41Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FNSI_PETCR8.366e-1427.01Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_ARATH1.093e-1325.27Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FL3H_MALDO1.864e-1327.42Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
LDOX_PETHY3.179e-1327.37Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FL3H_VITVI5.423e-1327.84Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]

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Properties
Property NameValue
Genbank descriptionC31702E08EF StrClemenN Citrus clementina cDNA clone C31702E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923237 ID=FC923237; Name=FC923237; organism=Citrus clementina; type=EST; length=710bp
GAAACTAGCTAAGTCTGCAGAAGAGTAGAAGAAAACAAAAAGGTAATAGC
TAGAAATCAGTTAATCTAAATCTATATAACATGGAGGCAAAAGCAACAGT
TATTGGGAATTCTCTCGTGGAGCCTTCGATTCTGGAGCTGGCAAATAATC
TGCCACTGACAACTGTTCCGCCACGTTATGTTCGCCCTGAGATAGACCAT
CCCTTGATTCGCAACGACGATTCTTCAGCACAACAACTTCCAGTCATTGA
CATGCACACGTTGCTCTCTGGGGATGACTCAGAGCTTGAGAAGCTTGACC
ATGCATGTAAAGAGTGGGGTTTCTTTCAGTTGATGAATCATGGAGTGAGC
AGTTCATTGGTGGAGAAAGTGAAAGCAGAGATTCAAGAATTCTTTAATCT
TCCAATTGATGAGAAAAAGAAGTTTTGGCAGCAGCCAGGAGATATTGAGG
GATTTGGGCAGCTTTTTATTACGTCTGAAGAGCAGAAGCTTGATTGGGGA
TACGGCTTTACTATGTTCACTCTCCCAACCCATCTGAGGAAACCCCACTT
GTTCCCCAAGTTGCCTCTTCCATTCAGAGATGACTTGGAAGTTTACTTAA
CGGAACTTAAAAATCTTACCTTGAAAATCCTTGACCTAATGGCTAAAGCT
CTAAGAATGGATCCCAATGACATGACAGAGCTGTTTGAAACGGGATGCAT
CGTTAAGGAT
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