FC923238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.333e-43 Identity = 103/210 (49.05%), Postives = 123/210 (58.57%), Query Frame = 1 Query: 85 MNDLLTDSFVSDARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDLL SF RGQ SR+ D+E+G + D G+E F K++Q I+KQ +EESKSVTKA MKAIKK MEKDVDEVG IAR +K K+E ++RENLANRQKPGC KG+ VDRSR T +L K+ K+ M EFQ L G R DE+TI IFQKA EQGRGQV++TL E Sbjct: 1 MNDLLKGSFELP-RGQSSREGDVELGEQ---QGGDQGLEDFFKKVQVIDKQYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARFIKGKLEELDRENLANRQKPGCAKGSGVDRSRTATTLSLKKKLKDKMAEFQVLRENIQQEYRDVVDRRVYTVTGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAE 206
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.519e-40 Identity = 98/210 (46.67%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 85 MNDLLTDSFVSDARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDLL S + +R + +R +DIE G P +S D+G+ GF K++QEIEKQ +EE+K+VTKA MK+IK+RME+DVDEVG+I+R +K KIE ++RENL NR KPGC KGT VDR+R T A+ K+FK+ ++EFQTL G R DEE I IFQKA EQGRGQ+++TL E Sbjct: 1 MNDLLKGS-LEFSRDRSNR-SDIESG-HGPGNSGDLGLSGFFKKVQEIEKQYEKLDKHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISRFIKGKIEELDRENLENRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNIQQEYREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAE 207
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22 Identity = 64/216 (29.63%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 85 MNDLLTDSFVSDARGQPSRDNDIEMG------TRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDL + SF G+PS D+ G S+ + ++ F + ++ +++++ +E+SK++ A +K ++ +M+ DV K A+ +K K+EA++R N ANR PGC G+S DR+R +V N L K+ + M F L G PDE T+ + QKA EQGRG+VL+T+ E Sbjct: 1 MNDLFSSSFSRFRSGEPSPRRDVAGGGDGVQMANPAGSTGGVNLDKFFEDVESVKEELKELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAANRSLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISSEYRETVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINE 216
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21 Identity = 66/212 (31.13%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 85 MNDLLTDSF--VSDARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDL + SF +D + Q D DIE G M ++ F + ++ ++ + NEE K+V A ++K ++ +M+ DV +V K + +K K+EA+ + N +R GC G+S DR+R +V + L K+ K+LM FQ L G + DE+TI + + QKA EQGRGQ+L+T+ E Sbjct: 1 MNDLFSSSFKKYTDLKQQAQMD-DIESGKET------MNLDKFFEDVENVKDNMKGVETLYKSLQDSNEECKTVHNAKKVKELRAKMDGDVAQVLKRVKMIKQKLEALEKANANSRNVSGCGPGSSTDRTRTSVVSGLGKKLKDLMDSFQGLRARMNAEYKETVERRYFTITGEQADEQTIENLISSGESENFLQKAIQEQGRGQILDTISE 205
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.738e-21 Identity = 63/210 (30.00%), Postives = 102/210 (48.57%), Query Frame = 1 Query: 85 MNDLLTDSFVSDARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDL ++SF + N ++G V M ++ F + ++ ++ + NEE K+V A ++K ++ +M+ DV V K + +K K+EA+ + N +R PGC G+S DR+R +V + L K+ K+LM FQ L G + DE+TI + + QKA EQGRGQ+L+T+ E Sbjct: 1 MNDLFSNSF---------KKNQAQLGD-VEAGQETMNLDKFFEDVENVKDDMKGVEALYKKLQDSNEECKTVHNAKKVKELRAKMDGDVAMVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRSSVVSGLGKKLKDLMDSFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGESENFLQKAIQEQGRGQILDTISE 200
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21 Identity = 68/213 (31.92%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 85 MNDLLTDSF--VSDARGQPSRDNDIEMGTRVPRSSSDMG-MEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDL++ SF +D Q D DIE S D G ++ F ++ +++ + NEESK+V + +K ++ RM+ V EV K + +K K+ A+ + N A R+ GC G+S DR+R +V + L K+ K++M +FQ L G + DEET+ + + QKA EQGRGQV++TL E Sbjct: 1 MNDLISSSFKRYTDLNHQVQLD-DIES----QNVSLDSGNLDEFFGYVESVKEDMKAVDEIHKRLQDANEESKTVHDSKAVKKLRARMDSSVTEVLKRVKMIKTKLVALEKSNAAQRKVAGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQRLRTKMATEYKETVERRYFTVTGQKADEETVEKLISSGESERFLQKAIQEQGRGQVMDTLSE 208
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19 Identity = 64/215 (29.77%), Postives = 99/215 (46.05%), Query Frame = 1 Query: 85 MNDLLTDSFVSDAR--GQPSRDNDIEMGTRVPRSSSDMG---MEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXPPDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDLL+ SF + P ++IEM S G ++ F ++ + + + NE+SK++ A+ +K +KK+M+ DV K AR +K +EA++R N NR P G+S DR R +V N L K+ K+ M +F + G PDE T+ + QKA EQGRG++L+T+ E Sbjct: 1 MNDLLSGSFKTSVADGSSPPHSHNIEMSKAKVSGGSCHGGNNLDTFFLDVEVVNEDLKELDRLCHNLRSSNEQSKTLHNANAVKELKKKMDADVTAALKTARRLKGNLEALDRANEVNRSLPESGPGSSSDRQRTSVVNGLRKKLKDEMEKFSRVRETITNEYKETVGRMCFTVTGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINE 215
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY112_ARATH (Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.202e-14 Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 85 MNDLLTDSFVS------DARGQPSRDNDIEMGTRVPRSSS---DMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTL 534 MNDL+T SF+S AR D D+E G S + + GF ++I+ I+ + NEE+KS ++ ++ RME ++ + + A VK IE + + N+ANR ++G+ VDR+R ++TN + K+ ++ M+EF L Sbjct: 1 MNDLMTKSFLSYVELKKQARTDMESDRDLEKGEDFNFDFSPADEENLSGFFQEIETIKTLIEEITHLLLDLQNLNEETKSTHSTKILRGLRDRMESNIVTISRKANTVKTLIETLEKRNVANR--TSFKEGSCVDRTRTSITNGVRKKLRDTMSEFHRL 157
BLAST of FC923238 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12 Identity = 56/218 (25.69%), Postives = 97/218 (44.50%), Query Frame = 1 Query: 85 MNDLLTDSFVSDARGQPSRDNDIEMG-------TRVPRSSSDMGMEGFNKQIQEIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIXP-PDRNWKQ*AIFQKANSEQGRGQVLNTLEE 714 MNDL+T SF+S + + D+E G D + F ++ + ++ ++ +EESK V KA +K+++ ++ ++ + A+++K+K+E +++ N ++ GT V RSR VTN L K+ KE+M EFQ L G ++E I N +A E G+G+VL T+ E Sbjct: 1 MNDLMTKSFMSYVDLKKAAMKDMEAGPDFDLEMASTKADKMDENLSSFLEEAEYVKAEMGLISETLARIEQYHEESKGVHKAESVKSLRNKISNEIVSGLRKAKSIKSKLEEMDKANKEIKRL----SGTPVYRSRTAVTNGLRKKLKEVMMEFQGLRQKMMSEYKETVERRYFTVTGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVE 214 The following BLAST results are available for this feature:
BLAST of FC923238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923238 ID=FC923238; Name=FC923238; organism=Citrus clementina; type=EST; length=736bpback to top |