FC923242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 217 EEAKAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 ++ K+ + +HPPYFQMI EAL+AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ASYKLS Sbjct: 39 KKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLS 117
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.342e-17 Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 238 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 TP+HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++ SYKL+ Sbjct: 52 TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLA 123
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-17 Identity = 40/72 (55.56%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 238 TPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 +P+H PY +M++EA+ +L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ SYKLS Sbjct: 47 SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 118
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16 Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 226 KAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 K TP+HPPYF+MI +A++ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ SYKL Sbjct: 49 KRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 37/78 (47.44%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 217 EEAKAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 ++ K+ T SHP +F+MI++A+ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ S+KL Sbjct: 41 KKPKSKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15 Identity = 40/80 (50.00%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 214 REEAKAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 ++ +K SHP Y +MI +A+++L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++ S+KLS Sbjct: 51 KKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 226 KAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 K T SHP Y +MI +A++ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++AS+K+ Sbjct: 55 KKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13 Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 244 SHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 SHP Y +MI +A++ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++AS+KL Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
BLAST of FC923242 vs. ExPASy Swiss-Prot
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 214 REEAKAVQTPSHPPYFQMITEALMALQDKSGSSPYAIAKYMEEKH-KDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 + + K P+HPPY QM+T+A+++L+++ GSS A+ K++E K+ KD F K L++ LK F G L+K++ SYKLS Sbjct: 14 KTQKKPKTAPTHPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLS 94 The following BLAST results are available for this feature:
BLAST of FC923242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923242 ID=FC923242; Name=FC923242; organism=Citrus clementina; type=EST; length=752bpback to top |