FC923244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41 Identity = 89/179 (49.72%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 140 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL QEEE L +LQ LFG KI DY+IVVF YLG P LK +L LC R +LFDN+ Sbjct: 32 DEFSASQPHPVEN-IVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLILCGQRMILFDNK 209
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 2 Query: 176 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 + +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL D + + EI+ C+ MA++GIHAVL +EEE+ +++LQ +FG +I DY IVVF Y CP+ L ++L+LC R VLFDN+ Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDYCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGRKVLFDNK 172
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA4_HUMAN (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 58/172 (33.72%), Postives = 95/172 (55.23%), Query Frame = 2 Query: 161 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+DTPG+FD + KEI++CI + G HA+L +EE A + +FG++ +MI++F YL RE P+ +++++ + +R +N+ Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALL-LVVPLGRYTEEEHKATEKILKMFGERARSFMILIF--TRKDDLGDTNLHDYL-REAPEDIQDLMDIFGDRYCALNNK 192
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA4_RAT (GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 +VL+G+TG GKS+TGNSILGR+AF S + +T CE + + DG+ + V+DTPG+FD KEI +C+ + G HA+L EE A L ++F KK +MI++ YL P+ L+E++ NR LF+N+ Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLLVIPLGCYTV-EEHKATRKLLSMFEKKARRFMILLL--TRKDDLEDTDIHEYL-ETAPEVLQELIYEFRNRYCLFNNK 192
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA7_HUMAN (GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 54/164 (32.93%), Postives = 83/164 (50.61%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDN 673 +VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD + KEI +CI + G HA++ +EE+ + ++ +FGK +M+++F + LK I++ C NRC F N Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIV-LVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFI---ADADVGLKSIVKECGNRCCAFSN 169
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA4_MOUSE (GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 +VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD +EI + + + G HA+L EE A + +FGK+ +MI++ YL + PK +E++ NR LF+NR Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFDTEVPDADTQREITRYVALTSPGPHALLLVVPLGRYTV-EEHKATQKILDMFGKQARRFMILLL--TRKDDLEDTDIHEYL-EKAPKFFQEVMHEFQNRYCLFNNR 192
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA8_HUMAN (GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 173 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP LF A +E + I C+ ++ +HA+L ++EE A +Q +FG + ++I+VF E KPLK+++Q + R +F+N+ Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETA-KGIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFI----EKNKPLKQLVQDYEGRYCIFNNK 171 HSP 2 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 51/168 (30.36%), Postives = 77/168 (45.83%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG---LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 +VLVGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP + D + +E+ +C+ + G +E++ A+ L+ +FG Y I++F ++ K L+ I + C R F+N+ Sbjct: 441 IVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKG-DTFFVLVFQLGRFTEEDKTAVAKLEAIFGADFTKYAIMLF--TRKEDLGAGNLEDFMKNSDNKALRRIFKKCGRRVCAFNNK 604 HSP 3 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 58/174 (33.33%), Postives = 80/174 (45.98%), Query Frame = 2 Query: 158 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVT-STCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 +P E TV+LVG+ G GKSA GNSILGR+AF++ S VT S R+ K + V++ID P + V K I G HA L + +EA L ++Q FG+K F+YMI++ R K L ++Q C NR F+ R Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRK--KKVSIIDAPDISSLKNIDSEVRKHIC-------TGPHAFL-LVTPLGFYTKNDEAVLSTIQNNFGEKFFEYMIILLTRKEDLGDQDLDTFL---RNSNKALYGLIQKCKNRYSAFNYR 402
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA2_HUMAN (GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 52/171 (30.41%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 164 SNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +IDTP +F + E + KE+ +C ++ G H +L Q+++AA ++ +FG+ + IV+F Y+ K L +++ C R F+NR Sbjct: 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAA-QRVKEIFGEDAMGHTIVLF--THKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNNR 185
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA1_HUMAN (GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 58/181 (32.04%), Postives = 88/181 (48.62%), Query Frame = 2 Query: 158 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVG-KEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNRLXMRPRE 697 S R ++LVGRTG GKSATGNSILG+R F SR ++ VT C + D V V+DTP +F G +E C ++ G HA+L Q+++ A+ ++ +FG+ + +M++VF Y+ + L+E++ C R FDNR R +E Sbjct: 22 SRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRAC-TTGSRRWDKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQ-AVRQVRDMFGEDVLKWMVIVF--TRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDNRATGREQE 198
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA5_HUMAN (GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 54/190 (28.42%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 104 GTFYMMGGSAIDDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDN 673 G + M +D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T +G+ V V+DTP +F+ A ++ + K I C ++ G H +L Q + A+ ++ +FG +++++F Y+ LK++++ C+ R F+N Sbjct: 7 GKYGTMAEGRSEDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQLGRFTAQ-DTVAIRKVKEVFGTGAMRHVVILF--THKEDLGGQALDDYVANTDNCSLKDLVRECERRYCAFNN 189 The following BLAST results are available for this feature:
BLAST of FC923244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923244 ID=FC923244; Name=FC923244; organism=Citrus clementina; type=EST; length=699bpback to top |