FC923248

Overview
NameFC923248
Unique NameFC923248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923248 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 1 
Query:  406 YLGKLESHPLTTKGISSSLIYVAADLTSQMITLP--PSGSIDSIRTLRMAVYGMLILGPSQHYWFNFLSRILPKRDALTTLKKIFMGQAIYGPLTTTIFFSYM 708
            YL +L  +P+ TK ++S  +Y+ +D   Q I L        D  R++RMAV+G  + GP  HYWF +L +  PK+       K+ + Q +  P+   +FFS M
Sbjct:   15 YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGM 117
The following BLAST results are available for this feature:
BLAST of FC923248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PX24D_DICDI1.751e-1133.98PXMP2/4 family protein 4 OS=Dictyostelium discoide... [more]
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Properties
Property NameValue
Genbank descriptionC31702F07EF StrClemenN Citrus clementina cDNA clone C31702F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923248 ID=FC923248; Name=FC923248; organism=Citrus clementina; type=EST; length=714bp
GAATCAAAATAAAATGTTGACAATTAAAAATTTGTAGCTAGACGATTACA
AAGACCCGAATGGCTGAATCCATATGCCGCCTTCGGTAGAAATCCTTTCA
GCCTTTCCCAAATGATATAGAGAAAAATGGGCAGCAAATGCAAATCCGTA
AAAACATTAAGCTACAGCTTCCTCCTTCGACTCTCAGAGCAACAACAATC
TCTTCACGGAGTTAGTTCCTTTATCCAGCCCCTCCTTACCAACCAACAAT
GGAGGAGATTTTATTGTTCGCGCCCACTCAGCAAAATTCGAGATCCCAAA
ATCTTTCGTTCTTTGAATTTATCGTCTCGTTATCGTTCTCACTCTCATTC
ATTTTCTTCATTCTCGTCTAATTCAAGTTCGTCAAAGTTTGGATTTGTGG
GATGGTATTTGGGCAAGCTCGAATCGCATCCACTTACCACGAAGGGCATT
TCATCTTCACTTATTTACGTGGCCGCTGACTTAACATCTCAGATGATTAC
ATTGCCACCTTCTGGTTCTATTGACTCAATAAGGACGTTACGCATGGCAG
TATATGGGATGCTAATTTTAGGGCCATCACAGCATTATTGGTTCAATTTT
CTGTCTAGAATTTTACCAAAGCGGGATGCATTAACAACCTTGAAGAAGAT
TTTTATGGGGCAGGCCATATATGGACCGTTGACAACCACTATTTTCTTCT
CTTATATGCAGCAT
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